Lagenorhynchus albirostris (white-beaked dolphin): 132514388
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Entry
132514388 CDS
T10760
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb00310
Lysine degradation
lalb01100
Metabolic pathways
lalb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132514388 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
132514388 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lalb03036
]
132514388 (SETDB1)
Enzymes [BR:
lalb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
132514388 (SETDB1)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
132514388 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
132514388 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
132514388
NCBI-ProteinID:
XP_059994994
LinkDB
All DBs
Position
2:complement(77830488..77860616)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPLAPPAPPGPPLSPQAGDSES
LESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQTHRSPLGSTTS
APAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYR
GKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFL
EMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGK
GVFINTGAEFLVGCDCKDGCRDKSKCTCHQLTVQATACTPGGQINSNSGYQYKRLEECLP
TGVYECNKRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGK
ILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSSGVDLKDQEDGNSGT
EDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMPSKDSRPPDLGPP
RVPVPPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGHAG
GGRGEAEKASTSGLGFKDEGDIKQPKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEGLRR
PPSKTSMHQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQT
ISSGSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRK
NTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRI
RAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctgggtatatctatggaggaactt
cggcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagttctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagaattgagtaaagatggtgacctggtggtt
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgacggc
tacgcttcctatgttacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggttttgctcaagagtggacagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctacgctagagaagaagcaaggcggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcccgtggtccagtacactcaggatctgacc
agtactggaacccagttcaagccagtggagccccctcagcctacagctccacctgcccca
cttgccccacctgccccacctggtccacctctgtccccccaggcaggtgacagtgaaagc
ttggaaagccagcttgcccaatctcggaagcaggtagccaaaaaaagcacatccttccgg
ccaggatctgtgggctctggtcattcctcccctacatcgcctgcactcagtgaaaatgct
cctggtgggaaacctgggatcagtcagacacatagatcacctttaggatccacaacctct
gctccagcacccccagcacccccagctcccccagcacccccagccttccatggcatgctg
gagcgggccccggcagagccctcctaccgcgcccctatggagaagcttttctacttacct
catgtctgcagctatacttgtctgtctcgagtcagacctatgagaaatgagcagtatcgg
ggcaagaaccctctcctagtcccactactgtatgacttccggcggatgacagcccggcgc
cgagttaaccgcaagatgggctttcatgttatctataagacaccctgtggcctctgcctt
cggacaatgcaagagattgagcgctacctttttgagacaggctgtgacttcctcttcctg
gagatgttctgtttggatccatatgttcttgtggaccgaaagtttcagccctataagcct
ttttactatattttggacatcacctatgggaaggaagatgttcctctgtcctgtgtcaat
gagattgacacaactcccccacctcaggtggcctacagcaaggaacgaatcccgggcaag
ggtgttttcattaacacaggcgctgaatttctggttggctgtgactgcaaagatgggtgc
cgggacaagtccaagtgtacctgccatcagctaactgtccaggctacagcctgcacccca
ggcggccaaatcaactctaactctggctaccagtacaagagactagaagagtgtcttccc
acaggagtttatgagtgtaacaaacgctgcaattgtgacccaaacatgtgcacaaaccgg
ttggtgcagcatggactgcaggttcgactgcagctcttcaagacccagaacaagggctgg
ggtatccgctgcttggatgacattgccaaaggctcctttgtctgtatctatgcaggcaaa
atcctgacagatgactttgccgacaaggagggcctggaaatgggtgatgaatattttgcc
aatctggaccatatcgagagcgtggagaacttcaaggaaggttatgagagtgatgtcccc
tgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaacagcggtaca
gaggaccccgaagagtccaatgacgatagctcagatgataacttctgtaaggatgaggac
ttcagcaccagctcggtgtggcgcagctatgctacccggcggcagacccggggccagaag
gagaatggattgtctgagatgccttccaaggactctcgccccccagaccttgggccccca
cgtgttcctgtccctccgtcaatccctgtaggtggctgcaatccaccttcctctgaagag
acacccaagaacaaagtggcctcgtggttgagctgcaatagtgtcagtgaaggtggcttt
gctgactctgatagccgttcatccttcaaaactagtgaaggtggggaaggtcacgctggg
ggaggcagaggggaggctgagaaggcttccacctcagggctgggcttcaaggatgagggt
gacatcaagcagcccaagaaagaggaccctgatgaccggaacaagatgtcagtagttact
gaaagctctcgaaattatggttacaatccttctcccgtgaagactgaaggacttcgccgc
ccaccaagtaagactagcatgcatcagagccgacgactcatggcctctgctcagtcaaac
cctgacgacatcctgacactgtccagcagcacagaaagtgagggggaaagcgggaccagc
cgaaagcccactgctggtcagacttcagccacagccgttgacagtgatgatatccagacc
atctcctctggctctgaaggggatgactttgaggacaagaagaacatgtctggtccaatg
aagcgccaagtggcagtaaaatcaacccggggttttgctcttaaatcaacccatgggatt
gccattaaatcaaccaacatggcatccgtggaaaagggagagagtgcacctgttcgaaag
aacacacgccaattctacgatggggaggagtcttgctacatcatcgatgccaagcttgaa
ggcaacctgggccgctacctcaatcacagctgcagccccaacctgtttgtccagaatgtc
ttcgtggatactcatgatcttcgcttcccgtgggtggccttctttgccagcaagagaatc
cgggctgggacagaactcacctgggactacaactacgaggtgggcagcgtggagggcaag
gagctgctttgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
