KEGG   Lagenorhynchus albirostris (white-beaked dolphin): 132519056
Entry
132519056         CDS       T10760                                 
Symbol
THBS1
Name
(RefSeq) thrombospondin-1 isoform X1
  KO
K16857  thrombospondin 1
Organism
lalb  Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04015  Rap1 signaling pathway
lalb04115  p53 signaling pathway
lalb04145  Phagocytosis
lalb04148  Efferocytosis
lalb04151  PI3K-Akt signaling pathway
lalb04350  TGF-beta signaling pathway
lalb04510  Focal adhesion
lalb04512  ECM-receptor interaction
lalb04518  Integrin signaling
lalb04820  Cytoskeleton in muscle cells
lalb05144  Malaria
lalb05165  Human papillomavirus infection
lalb05205  Proteoglycans in cancer
lalb05206  MicroRNAs in cancer
lalb05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:lalb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    132519056 (THBS1)
   04350 TGF-beta signaling pathway
    132519056 (THBS1)
   04151 PI3K-Akt signaling pathway
    132519056 (THBS1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    132519056 (THBS1)
   04518 Integrin signaling
    132519056 (THBS1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    132519056 (THBS1)
   04148 Efferocytosis
    132519056 (THBS1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    132519056 (THBS1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    132519056 (THBS1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    132519056 (THBS1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    132519056 (THBS1)
   05205 Proteoglycans in cancer
    132519056 (THBS1)
  09162 Cancer: specific types
   05219 Bladder cancer
    132519056 (THBS1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    132519056 (THBS1)
  09174 Infectious disease: parasitic
   05144 Malaria
    132519056 (THBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lalb04131]
    132519056 (THBS1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lalb00536]
    132519056 (THBS1)
Membrane trafficking [BR:lalb04131]
 Endocytosis
  Phagocytosis
   Opsonins
    132519056 (THBS1)
Glycosaminoglycan binding proteins [BR:lalb00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   132519056 (THBS1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 cEGF Laminin_G_3 TSP1_ADAMTS Laminin_G_2 TSP1_CCN EGF Laminin_G_1
Other DBs
NCBI-GeneID: 132519056
NCBI-ProteinID: XP_060003011
LinkDB
Position
1:83373392..83389625
AA seq 1198 aa
MQVPCDSGVYSALSVAARSFHPVPLPHTPELSPTPGPAQRAHRVSCSCLIESGGDNSVFD
IFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRVEKGFLLLA
SLRQMKKTRGTLLAVERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQ
WKSITLFVQEDRAQLYIDCEKMENAELDAPIQSIFTRDLASIARLRIAKGGVNDNFQGVL
QNVRFVFGTTPEDILRNKGCSSSTSVLLTLDNNVVNGSSPAIRTNYIGHKTKDLQAMCGI
SCDELSNMVLELRGLRTIVTTLQDSIRKVTEENKELVNELRRPPLCYHNGVQYRNSEEWT
VDSCTECRCQNSVTICKKVSCPIMPCSNATVPDGECCPRCWPSDSADDGWSPWSEWTSCS
VTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCG
DGVITRIRLCNSPSPQMNGKPCEGEARETKACQKDACPINGGWGPWSPWDICSVTCGGGV
QKRSRLCNNPTPQFGGKDCVGDVTENQICNKQDCPIDGCLSNPCFADVKCTSYPDGSWKC
GACPPGYSGNGIRCKDVDECKEVPDACFNHNGEHRCENTDPGYNCLPCPPRFTGSQPFGR
GVEHATTNKQVCKPRNPCMDGTHECNKNAKCNYLSHYSDPMYRCECKPGYAGNGIICGED
TDLDGWPNKDLVCVANATYHCKKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRD
NCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDN
CQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLD
NCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVPNPDQKDSDGDGRGDACKD
DFDQDNVPDIDDICPENVDISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNC
DPGLAVGYDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNP
TRAQGYSGLSVKVVNSTTGPGEHLRNALWHTGNTPGQVRTLWHDPRQIGWKDFTAYRWRL
SHRPKTGFIRVVMYEGKKIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgcaggttccctgtgactctggtgtttattcagctctttcggtggctgccaggagcttt
caccctgtccctctgccccacaccccagagctgagccccaccccaggcccagcccagaga
gctcaccgtgtgtcctgctcttgtctaatagagtctgggggagacaacagcgtgtttgac
atctttgaactcacgggggctgcccgcaagggttccgggcgccgactggtgaagggtcct
gacccttccagcccagctttccgcatcgaggatgccaacctgatcccccctgtgcctgac
gacaagttccaagacctagtggatgctgtgcgggtggagaaaggtttcctcctcctggcc
tccctgaggcaaatgaagaagacccggggcacgctgctggccgtggagcggaaagaccac
tccggccaggtcttcagcgtggtctccaatggcaaggcgggcaccctggacctgagcctg
accgtgcaggggaagcagcacgtggtgtcggtggaagaagcactcctggcgactggccag
tggaagagcatcaccctgtttgtgcaggaggacagggcccagctgtacatcgactgtgag
aagatggagaatgccgagctggatgctcccatccaaagcatcttcaccagggacctggcg
agcatcgccaggctccgcatcgccaaaggaggtgtcaatgacaatttccagggcgtgctg
cagaacgtgagatttgtctttggaaccacaccagaagacatcctcaggaacaaaggctgc
tccagctctaccagtgtccttctcacccttgacaacaatgtggtgaacggttccagccct
gccatccgcaccaactacattggccacaagacaaaggatctgcaagccatgtgcggcatc
tcctgtgacgagctatccaacatggtcctggagcttaggggcctgcgcaccatcgtgacc
acgctgcaggacagcatccgcaaagtgactgaagagaacaaagagctggtcaatgagctg
aggaggcccccgctctgctaccacaacggagtccagtacaggaatagcgaggagtggacg
gtggacagctgcactgagtgtcgctgccagaactcagttaccatctgcaaaaaagtgtcc
tgcccaatcatgccctgctccaatgccacagttcctgatggagaatgctgcccgcggtgt
tggcccagcgattctgcggacgatggctggtccccatggtctgagtggacctcttgctct
gtgacatgtggcaacggaatccagcagcgtggccgctcctgcgacagcctgaacaacaga
tgcgagggctcctccgtgcagacacggacctgccacattcaggagtgtgacaagagattt
aaacaggatggcggctggagccactggtccccgtggtcgtcttgttctgtaacatgtgga
gacggtgtgatcacaagaatccggctgtgcaactctcccagcccccagatgaatgggaag
ccatgtgagggcgaagctcgggagaccaaagcctgccagaaagacgcctgccccatcaat
ggaggctggggaccctggtcgccatgggacatctgttccgtcacctgtggaggaggggtg
cagaaacgtagtcggctctgcaacaaccccacaccccagtttggaggcaaggactgcgtt
ggtgatgtgacagaaaaccagatctgcaacaagcaggactgtcccatcgatggatgcctg
tccaatccctgctttgcggacgtcaagtgtaccagctaccctgacggcagctggaagtgt
ggtgcttgtcccccgggctacagcggaaatggcatccggtgcaaagatgttgatgagtgc
aaagaagtccctgatgcctgcttcaaccacaacggagagcacaggtgtgagaacacagac
cccggctacaactgcctgccctgcccgccacgcttcaccggctcgcaacccttcggccgg
ggcgtggaacatgccaccaccaacaaacaggtgtgcaagccccgcaacccctgcatggac
ggcacacacgagtgcaacaagaatgccaagtgcaactacctgagccactacagtgacccc
atgtaccgctgcgagtgcaagcccggctacgccggcaacggcatcatctgtggggaggac
acagacctggacggctggcccaacaaggacctggtgtgcgtggccaatgcaacttaccac
tgcaaaaaggataattgccccaaccttcccaactcagggcaggaagactatgacaaggac
ggaatcggcgacgcctgtgacgatgacgatgacaatgataaaattccagatgacagggac
aactgtccgttccattacaacccagcccagtatgactatgacagagacgacgtgggagac
cgctgtgacaactgcccctacaaccacaacccagaccaggctgacacggacaacaacggg
gaaggagacgcctgcgcagcagacattgatggggacggtatcctcaatgaacgggacaac
tgccagtatgtctacaacgtggaccagagagacactgacatggatggggttggagatcag
tgtgacaactgccccctggaacacaatccagatcagctcgattctgactcggaccgcatt
ggagatacctgtgacaataatcaggacattgatgaagacggccaccagaacaacctggac
aactgtccctacgtgcccaacgccaaccaggccgaccatgacaaggatggcaagggcgat
gcctgcgaccatgacgacgacaatgacggcattcctgatgacaaggacaactgcaggctc
gtgcccaatcctgaccagaaggactctgatggtgatggtcgaggtgatgcttgcaaagat
gattttgaccaggacaacgtgccagacatcgatgacatctgtcccgaaaacgttgatatc
agtgagaccgatttccgccgattccagatgattcctctagatcccaaagggacgtcccaa
aatgaccctaactgggttgtacgccatcagggtaaagaactcgtccagaccgtcaactgt
gatcctggacttgctgtaggttatgatgagtttaacgctgtggacttcagtggcaccttc
ttcatcaacaccgaaagggatgatgactatgccggatttgtctttggctaccagtccagc
agccgcttctacgttgtgatgtggaagcaagtcactcagtcctactgggacaccaacccc
acaagggctcagggatactccggcctttctgtgaaggtcgtgaactccaccacggggcct
ggcgagcacctgcggaatgccctgtggcacacaggaaacacccctggccaggtacgcacg
ctgtggcatgaccctcgtcaaataggctggaaagatttcaccgcctacagatggcgtctg
agccacaggccaaagacaggtttcattagagtggtgatgtatgaagggaagaaaatcatg
gccgactcaggacccatctatgacaaaacctatgctggcggtaggctagggttgttcgtc
ttctctcaagaaatggtgttcttctccgacttgaaatatgaatgcagagattcctaa

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