Lagenorhynchus albirostris (white-beaked dolphin): 132525583
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Entry
132525583 CDS
T10760
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132525583 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lalb03000
]
132525583 (KDM2A)
04121 Ubiquitin system [BR:
lalb04121
]
132525583 (KDM2A)
03036 Chromosome and associated proteins [BR:
lalb03036
]
132525583 (KDM2A)
Enzymes [BR:
lalb01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
132525583 (KDM2A)
Transcription factors [BR:
lalb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132525583 (KDM2A)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132525583 (KDM2A)
Chromosome and associated proteins [BR:
lalb03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
132525583 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
132525583 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
132525583
NCBI-ProteinID:
XP_060014432
LinkDB
All DBs
Position
9:complement(5527576..5634136)
Genome browser
AA seq
1167 aa
AA seq
DB search
MAAERARPEPVLRSGRGHKRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVT
FMEGRDFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNT
QKGIEMTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPR
HLKESQTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIP
PTAHNLELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVF
GGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQ
KESLSMDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLP
SLKKTLSGDSSSDSSRGSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHK
KCVPTGIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTI
PITKPHTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFG
GPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCVCNEIVHPGCLQ
MDGEGLLNEELPNCWECPKCYQEDSSEKTQKRKMEESDEEAVQAKVLRPLRSCDEPLTPP
PHSPTSMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVRE
KENNPSGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRV
LVQHCPARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQR
EVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPV
SLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIK
DPQIRDLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCS
HLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRK
ACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagcgtgcgcgtccggagcctgtgctccgcagtgggagaggccacaaacgt
ggtaccatgcgacgacgctatgaagatgatggcatttcagatgatgaaattgaaggaaaa
agaacttttgacttggaagagaaactccacaccaacaaatataatgcaaattttgttact
tttatggaaggaagagattttaatgtagagtatatccagcgaggtggcttaagagatcct
ctgattttcaagaactccgatggacttggaataaagatgccagatccagacttcactgtg
aatgatgtcaaaatgtgtgtggggagtcgtcggatggtggatgtcatggatgtgaacaca
cagaaaggcattgaaatgaccatggctcagtggacacgctactatgagaccccagaggag
gagcgagaaaaactctataatgtcatcagcctggagtttagccacaccaggctggagaat
atggtgcagcggccctccacggtggatttcattgactgggtagacaatatgtggccaagg
catttaaaagaaagtcagactgagtcaacaaatgccatcttggagatgcagtaccctaaa
gtgcagaagtactgtctgatgagtgttcgaggctgctatactgacttccatgtggacttt
ggtggtacctctgtttggtatcacatccatcaagggggaaaggtcttctggctcatcccc
cctacagcccacaacctggagctgtacgagaattggctgctgtcagggaaacagggagac
atctttctgggtgaccgggtgtcagattgccagcgcattgagctcaagcagggctatacc
ttcgtcattccctcaggctggattcatgctgtgtatactcctacagacacattagtgttt
ggaggcaattttttgcatagcttcaatatccccatgcagttaaaaatatacaacattgaa
gatcggacacgggttccaaataagttccgctatccattctactatgagatgtgttggtac
gtgttggagcgctatgtgtactgcataaccaaccgttcccacctaactaaggaatttcag
aaagagtcccttagcatggatttggagttaaatgggttggagtctggaaatggggatgag
gaagcagtagatcgagaaccccggcgcttgagcagcaggcgttctgtcctcactagccct
gtagccaatggggttaacctggattatgatggactgggcaaaacctgccgaagtcttcca
agtctgaagaaaactttgtctggggactcatcctctgactctagccggggctcccacaat
ggccaagtatgggatccccagtgtagccccagaaaggaccgacaggtgcatctgacccat
tttgagcttgaaggccttcgttgccttgtagataaattggagtctctgccactgcacaag
aaatgtgtccctacagggatagaagacgaagatgctctcattgctgatgtaaagattttg
ctggaggagcttgccaacagtgatcccaagttagccctcactggagtccctattgtacag
tggccgaaaagggataagcttaaattcccgacccggccaaaggtgcgggttcctaccatc
cccatcacaaagcctcacactatgaaaccagctccacggttaacacctgtgaggccagct
gctgcctcccccatagtgtcaggagccaggcggagacgagtgcgatgtcgaaaatgcaaa
gcctgtgtgcaaggagagtgtggtgtctgccactactgcagggacatgaagaagtttggg
ggccctggtcgcatgaagcagtcctgtgttctccggcagtgcttggcacccagactgcct
cactcagtcacgtgttccctctgtggagaggtggatcaaaatgaggagacacaggacttt
gagaagaaactcatggaatgctgtgtctgcaacgagattgttcatcctggctgcctccag
atggatggagagggtttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgc
taccaggaggacagctcagagaaaacccagaagcggaaaatggaagagagtgacgaagaa
gccgtgcaagccaaagtcctgcggcccctgcggagctgcgacgagcccctcacgccccca
cctcactcgcccacctccatgctgcagctcatccacgacccggcctccccccggggcgtg
gtgactcgttcatcccctggggccggccccagcgaccaccacagtgccagccgcgatgag
cgcttcaaacggcggcagttgctgcggctgcaggccacagagcgcaccatggtacgggaa
aaggagaacaatcccagcggcaaaaaggagctgtctgaagttgagaaagccaagatccgg
ggatcgtacctcactgtcacgctacagaggcccaccaaagagctccacgggacatccatt
gtgcccaagctgcaggccatcacggcctcctctgccaaccttcgccattccccccgtgtg
ctagtgcagcactgcccagcccgaaccccccagcgtggggatgaggaggggctgggggga
gaggaggaggaagaggaggaggaggaggaggaagatgacagtgcagaggaggggggtgca
gccaggctgaatggccggggcagttgggctcaggatggagacgaaagctggatgcagcgg
gaggtctggatgtctgtcttccgctacctcagccgcagagaactttgtgaatgtatgcga
gtgtgcaagacgtggtataaatggtgctgcgacaagagactttggacaaaaattgacttg
agtaggtgtaaggctattgtaccccaggctctcagtggcatcatcaagaggcagccagtt
agcctcgacctcagttggaccaacatctccaaaaaacaactgacgtggctcgtcaatagg
ctgccaggactgaaagacctcctcctggcaggctgctcctggtctgcagtctctgccctc
agcacctccagctgcccccttctcaggacccttgatcttcggtgggcagtaggaatcaag
gaccctcaaattcgggacttgctgactccaccggctgataaaccaggtcaggacaatcgc
agcaagctccggaacatgactgacttccggctggcgggccttgacatcacagatgccacg
cttcgcctcatcatccgccacatgcccctcctgtctcgactcgacctcagtcactgcagc
cacctgacagatcagtcctccaatctactcaccgctgttgggtcttccactcgttactcc
ctcacagagctcaacatggcaggttgcaataaattgacagaccagaccctgatctaccta
cggcgcatcgccaatgtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaa
gcctgcgagcacttcatctcagacttgtccatcaacagtctctactgcctgtctgacgag
aagctgatacagaagatcagctaa
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