Lagenorhynchus albirostris (white-beaked dolphin): 132525849
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Entry
132525849 CDS
T10760
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04010
MAPK signaling pathway
lalb04064
NF-kappa B signaling pathway
lalb04120
Ubiquitin mediated proteolysis
lalb04140
Autophagy - animal
lalb04144
Endocytosis
lalb04380
Osteoclast differentiation
lalb04620
Toll-like receptor signaling pathway
lalb04621
NOD-like receptor signaling pathway
lalb04622
RIG-I-like receptor signaling pathway
lalb04657
IL-17 signaling pathway
lalb04722
Neurotrophin signaling pathway
lalb04936
Alcoholic liver disease
lalb05132
Salmonella infection
lalb05133
Pertussis
lalb05135
Yersinia infection
lalb05140
Leishmaniasis
lalb05142
Chagas disease
lalb05145
Toxoplasmosis
lalb05152
Tuberculosis
lalb05160
Hepatitis C
lalb05161
Hepatitis B
lalb05162
Measles
lalb05168
Herpes simplex virus 1 infection
lalb05169
Epstein-Barr virus infection
lalb05170
Human immunodeficiency virus 1 infection
lalb05171
Coronavirus disease - COVID-19
lalb05200
Pathways in cancer
lalb05222
Small cell lung cancer
lalb05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
lalb05417
Lipid and atherosclerosis
Brite
Enzymes [BR:
lalb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132525849 (TRAF6)
Membrane trafficking [BR:
lalb04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
132525849 (TRAF6)
Ubiquitin system [BR:
lalb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
132525849 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132525849
NCBI-ProteinID:
XP_060015359
LinkDB
All DBs
Position
9:22158001..22185502
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AA seq
561 aa
AA seq
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MLLKIFLRRRKRAVDNHLTMSLLHWENSCGSSQSESDCCAAMAASSCGAAAKDDSVSGTA
STVNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRD
AGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHRAHCEFALM
NCPQCQRPFQKCQLNIHIVKECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNT
MLIREQMPNHYDLDCPTAPVPCTFSTFGCHEKMQRNHLARHLQEDTQSHMRMMAQAVQTL
SLAIAPAPQRGMLPCDSASLPRISSGCHSEVQNFQETIQQLEGRLVRQDHQIRELTAKME
TQSTYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFY
TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAP
VRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVST
RFDMGSLRREGFQPRSTDLGI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctactcaaaatctttttgagaagaagaaaaagagcagtcgataatcaccttactatg
agtctgctacactgggaaaacagctgtggatccagccagtctgagagcgactgctgtgct
gccatggccgccagctcctgtggtgctgcagcaaaagatgacagtgtgagtggaactgcc
agcacagtgaatctttccagctcttttatggaagagatccagggatatgacgtggaattt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcattacgggaagca
gtgcaaacaccatgcggccacaggttctgcaaagcctgcatcatcaaatcaataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttcctgac
aattttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtctg
cacaagatggaactgaggcatcttgaggatcatcgagcacattgtgagtttgctcttatg
aattgtccccaatgccaacgtcccttccaaaaatgccaacttaatattcacattgtcaag
gagtgtccaaggagacaggtttcttgtgtaaactgtgctgtatcgatggcatttgaagat
aaagagattcatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaacacc
atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccagtt
ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc
cacctgcaagaggatacccagtcgcacatgagaatgatggcccaggctgttcagacttta
agccttgcgatagctcccgcacctcagcgtggcatgctgccatgtgattctgcctctctg
ccccggatttcctctgggtgtcactcagaggtccagaatttccaagaaaccattcaacag
ttagagggtcgccttgtaagacaagaccatcaaatccgggagctgactgcaaaaatggaa
actcagagcacgtatgtaagtgagctaaaacgaactattcgaacccttgaggacaaagtt
gctgaaatagaagcacagcagtgcaatggaatttacatctggaagattggcaattttggg
atgcacttgaaatctcaagaagaggagaaacctgttgtcattcacagccccggattctac
acaggcaaacccggctacaaactatgcatgcgcctgcacctgcagctaccgactgcacag
cgctgtgccaactacatatccctctttgtccacacgatgcaaggagagtatgacagccac
ctcccttggcccttccagggtacgatacgccttaccatccttgatcagtctgaagcacct
gtaaggcaaaaccatgaagagataatggacgccaaaccagagctgcttgccttccagaga
cccacaatcccacggaaccccaaagggtttggctatgtgacctttatgcatctggaagcc
ctaagacaaagaaccttcatcaaggacgacacgttattagtacgctgtgaggtctccacc
cgctttgacatgggcagtcttcggagggagggttttcaaccacgaagtactgacttgggg
atatag
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