Lentibacter algarum: LentiSH36_02229
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Entry
LentiSH36_02229 CDS
T09071
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
lalg
Lentibacter algarum
Pathway
lalg00270
Cysteine and methionine metabolism
lalg00450
Selenocompound metabolism
lalg01100
Metabolic pathways
lalg01110
Biosynthesis of secondary metabolites
lalg01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lalg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LentiSH36_02229 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LentiSH36_02229 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lalg01007
]
LentiSH36_02229 (patB)
Enzymes [BR:
lalg01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LentiSH36_02229 (patB)
Amino acid related enzymes [BR:
lalg01007
]
Aminotransferase (transaminase)
Class II
LentiSH36_02229 (patB)
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WIF32676
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Position
complement(2215855..2217024)
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AA seq
389 aa
AA seq
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MNFDEIIDRKGTHSAKWDMMDKLYNVPAEDGIAMWVADMDFRPPACVQNALQGMLDHGIY
GYYGGDTEYRAAICWWMKTRHGWEVDPAAIFTTHGLVNGTALCVDTWTEKGDGVVLFTPV
YHAFAKVIKANGRRVVECPLVLENGRYEMDFDNYDALLDGSEKMVILCSPHNPGGRVWSE
AELKQVAEFAKTHDLILVSDEIHHDLVMPEAKHIAMANIEGIEDRLVMMTATTKTFNIAG
GHSGNVIIPNETLRAEFGAKMMALGISANSFGLEMAEAAYSPEGAEWVDALVAYINGNRE
IFDAGINSIPGLKSMPLEATYLAWVDFEDTGMSREEFTRRVEEDAKIAANHGPTFGTGGE
SFMRFNLATPRAYVEQAVERLQKAFADLQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacgagattatcgaccgcaagggcacccattctgcgaaatgggacatgatg
gacaagctctataatgtgcctgcggaagacgggatcgccatgtgggttgcagatatggat
tttcgtccacccgcttgtgtgcagaacgcgctgcaggggatgctggatcacgggatttac
ggctattatggcggcgatacagaataccgtgcggcgatctgctggtggatgaaaacccgt
catggctgggaggttgatcccgctgcgatctttacgacccacgggctcgtcaatggtacg
gcgctttgtgtggacacatggaccgaaaagggtgacggggtcgtgctcttcacgcccgtc
taccatgcttttgccaaggtgattaaggccaatggtcggcgcgttgttgaatgccccttg
gtgcttgagaacgggcgctacgaaatggactttgataactatgatgcgctgctggatggc
tcagagaagatggttattctgtgctcacctcataaccctggcggacgtgtctggagtgag
gctgagttgaagcaggtggctgagtttgccaagacgcatgatctgattttggtgtctgat
gaaatccaccatgatcttgtgatgcctgaggccaagcatatcgcaatggccaatatcgag
gggattgaggaccgccttgttatgatgacggcgacaaccaagacctttaatatcgcaggt
gggcattcggggaatgtgattatcccgaacgagacgttgcgcgctgagtttggcgcgaag
atgatggcgctgggcatttcggcaaactcttttgggcttgagatggccgaggctgcctat
agcccagagggtgcggagtgggttgatgcgcttgtggcctatatcaacgggaatcgtgag
atatttgatgcggggatcaacagtattccgggcttgaagtcgatgccgcttgaggcgacc
tatctggcgtgggttgattttgaagacacaggcatgagccgtgaagagtttacccgccgt
gtcgaggaagatgccaagatcgcagccaaccacgggccaacttttggcacaggtggggag
agtttcatgcgctttaacttggccacaccacgcgcctatgttgagcaggccgtggagcgg
cttcagaaagcttttgctgatctgcagtga
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