Leucobacter allii: MUN78_08555
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Entry
MUN78_08555 CDS
T09032
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lall
Leucobacter allii
Pathway
lall03030
DNA replication
lall03410
Base excision repair
lall03420
Nucleotide excision repair
lall03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN78_08555 (ligA)
03410 Base excision repair
MUN78_08555 (ligA)
03420 Nucleotide excision repair
MUN78_08555 (ligA)
03430 Mismatch repair
MUN78_08555 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lall03032
]
MUN78_08555 (ligA)
03400 DNA repair and recombination proteins [BR:
lall03400
]
MUN78_08555 (ligA)
Enzymes [BR:
lall01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUN78_08555 (ligA)
DNA replication proteins [BR:
lall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUN78_08555 (ligA)
DNA repair and recombination proteins [BR:
lall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUN78_08555 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUN78_08555 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUN78_08555 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUN78_08555 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
UOQ55766
LinkDB
All DBs
Position
complement(1814045..1816492)
Genome browser
AA seq
815 aa
AA seq
DB search
MNENPLDPPADFDAARAEVEALTAEIERLRLAYYSEATSLVSDAEYDARFHRLEALERAF
PELAGQDSPTRDVGAAVVSAGFPEHTHAERMLSLDNVFSLDEFREWAAKTLQAAGRPVRW
LTELKIDGLAISLAYRRGVLETATTRGDGTVGEDITENVDLIPAIPRELTGEGIPEFFEA
RGEVFLRGEDFLALNERQHELQAEFAAEQRAKGRAEEQIPIRFPEFANARNTAAGSLRQR
AEKKNAAELALMRERLGRLALYVHGIGAWSHPGFENQSDAYRLLGDWGLPVSPHSRVFDD
AEAVADFIVDRGEHRHDVEHEIDGIVVKVDELELHAELGETSRAPRWAIAYKYPPEEVHT
RLLDIRVGVGRTGRATPYAVMAPVKVAGSTVRQATLHNQQVVQAKGVRIGDTVVLRKAGD
VIPEVLGAVVELRDGSECEWRMPERCPECDAALRPMKDGDIDLRCPNARACPAQVRGRVE
HIGSRGGLDIEVLGEITAAALTQPEVPAEPPLETEAGLFDLTLEELVPIVVVVRDSETGE
PVVDEETGAPRRRAPFQRLGPASYPPGWEDASPAARRAAGVKKDHREVLPSKDAGTLLAE
LERAKSKPLWRLLVALNIRHVGPVAARALAERFGSLDAIRAATVDELSEVDGVGGTIAES
LHAWFAVDWHLEIVERWAAAGVQWSTPGHPGPGAAVAAGGVLEGLTVVATGSLDGFTRDG
AKEAIIQAGGKAASSVSKKTDFVAAGPGAGSKLGKAEELGIPVLDAAQFALLVTEGPDAL
GLGAAPSADAAGADGGAAAADAESEAGDEEGAAGE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagaacccgctggatccgcccgccgacttcgacgccgcgcgcgcggaggttgag
gcgctcaccgcagagatcgagcggctgcggctggcctactactcggaggcgacgagcctc
gtctccgatgcggagtacgacgcccgtttccaccggctcgaggcgctcgagcgcgccttc
cccgagctcgccggccaggacagcccgacgcgggacgtgggggccgccgtggtctcggcg
gggttcccggagcacacacacgccgagcgcatgctgagcctcgacaacgtgttctccctc
gacgagttccgcgagtgggcggcgaagacgctgcaggcggcggggcggccggtgcgctgg
ctcaccgagctcaagatcgacggcctcgccatcagcctcgcctatcggcggggcgtgctc
gagacggcgacgacgcgcggcgacgggacggtgggcgaggacatcaccgagaacgtcgat
ctcatccccgcgatcccgcgcgagctgacgggggagggcatcccggagttcttcgaggcg
cggggcgaggtcttcctgcggggcgaggacttcctcgcgctgaacgagcgccagcacgag
ctgcaggcggagttcgccgccgagcagcgcgcgaaggggcgggccgaggagcagatcccc
atccgcttcccggagttcgccaacgcccgcaacactgccgccggttcgctgcggcagcgc
gccgagaagaagaatgccgcggagctcgcgctcatgcgcgagcgcctcggacgcctggcg
ctctacgtccacggcatcggggcctggtcgcaccccggcttcgagaaccagtcggacgcg
taccggctgctcggggactgggggctgcccgtgtcgccgcactcgcgcgtcttcgacgat
gcggaggcggtcgccgacttcatcgtcgaccggggcgagcaccggcacgacgtcgagcac
gagatcgacggcatcgtggtgaaggtcgacgagctggagctccacgccgagctcggggag
acgagccgcgcgccgcggtgggccatcgcctacaagtacccgccggaggaggtgcacacc
aggctcctcgacatccgcgtgggcgtggggcgcaccgggcgggcgaccccctacgccgtg
atggcgccggtgaaggtcgccggctcgacggtgcgacaggcgacgctgcacaaccagcag
gtggtgcaggcgaagggcgtgcggatcggcgacaccgtcgtgctgcgcaaggccggcgac
gtcatccccgaggtgctcggcgccgtcgtcgagctgcgcgacggcagcgagtgcgaatgg
cggatgccggagcgctgcccggagtgcgacgccgcattgcgccccatgaaggacggcgac
atcgatctgcgctgtccgaacgcccgcgcctgcccggcgcaggtgcggggccgcgtggag
cacatcggctcgcgcggcggcctcgacatcgaggtgctcggcgagatcacggcggcggcg
ctgacccagcccgaggtgcccgcggagcctccgctcgagaccgaggcggggctcttcgat
ctcacgctcgaggagctcgtccccatcgtcgtcgtggtgcgcgacagcgagaccggggaa
cccgtcgtcgacgaggagaccggtgcaccccgccgccgggcgccgttccagcgcctcgga
cccgcgagctatcctccgggctgggaggacgcgagccccgcggcgcggcgggccgccggg
gtcaagaaggatcatcgcgaggtcctgccctccaaggatgccggcacgctgctcgccgag
ctcgaacgggcgaagtcgaagccgctctggcggctcctcgtcgccctgaacatccgccac
gtcgggccggtcgccgcacgcgcgctcgccgagaggttcggctccctcgacgccatccgg
gcggcgacggtcgacgagctctccgaggtcgacggggtcggcgggacgatcgccgagtca
ctgcacgcctggttcgccgtcgactggcatctggagatcgtcgagcgatgggcggccgcc
ggcgtgcagtggtcgacgccgggccacccgggtcccggcgccgccgtcgcggccggcggc
gtgctcgaggggctcaccgtcgtcgccaccgggtcgctcgacggcttcacccgggacggc
gcgaaggaggccatcatccaggccggcggcaaggcggcctccagcgtgtcgaagaagacc
gacttcgtcgcggcgggccccggtgcgggttcgaagctcggcaaggccgaggagctcggg
atccccgtgctcgacgcggcgcagttcgccctgctcgtgaccgaggggccggatgccctc
gggctgggcgctgcgccctcggcggatgcggcgggcgccgatggcggagccgcagcggca
gacgcggagagcgaagccggggacgaggagggcgccgcgggggagtga
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