Lactobacillus amylolyticus: B1745_01275
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Entry
B1745_01275 CDS
T05057
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lamy
Lactobacillus amylolyticus
Pathway
lamy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lamy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B1745_01275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lamy03021
]
B1745_01275
03400 DNA repair and recombination proteins [BR:
lamy03400
]
B1745_01275
Enzymes [BR:
lamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B1745_01275
Transcription machinery [BR:
lamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B1745_01275
DNA repair and recombination proteins [BR:
lamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B1745_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ARD06355
LinkDB
All DBs
Position
259561..263232
Genome browser
AA seq
1223 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWSC
ACGKYKGVRYRGIICDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSKMGLVLDI
SPRLLEEVIYFAAYIVIDPGDTDLEPKQLLTEAEYREQKAKYGNRFEAKMGAEAIRDLLK
KVDLAKEVADLKKELQTATGQKRTRAIRRLDILDAFKNSGNKPEWMVMDAVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGIASNIKNAKRKIDREDDDIWDVLEDVIKERPVLLNRAPTLHR
LSIQAFEPVLVPGKSIRLHPLACEAYNADFDGDQMAIHVPLSDEAVAESRLLMLAAHHIL
APKDGKPIVTPSQDIVLGNYWLTQAEKGREGEGMIFTSPAEAAVAYANGDIHYHTIIGMS
ADSMPKKPWPKGHEHGIFITTYGKIVFNQIFPDDYFYINEPTEENLNNPLDAKYFLAEGE
DIHKKIDSIADDLIATPFKKDFLSDSIATVYKYYKVQRTSEYLDDLKKLGYTSSTTSGIT
IGMTDVPEITDKDEKVDKAHKQVDIVSKQFRRGLITEQERHDRVISIWNKCKDEVQNEIA
QIYDPRNPITIMADSGARGNISNFTQLAGMRGLMATPNGGLFEIPVTSNFKEGLSVLELF
MSTHGARKGMTDTALKTAQSGYLTRRLVDVAQDVIIRDDDCGTDRGITVSAIMEGDEMIE
PLFDRLLGRFTAETVKDPKTGETIVAKDVMMDENLAHKVCDAGLTHVKIRSILTCDTPHG
VCRKCYGMNLATGEEVEVGEAVGTVAAQSIGEPGTQLTLRTFHNGGVAGAEDITQGLPRV
QELFEARNPKGRATISEVDGIVDSIQENPADHTREITVKGKIDTRSYDVPYTASVAVAEG
DTVHRGDKLTLGSIDPKELIQVTDTLTTEEYILAEVQKAYRMQGVDISDKHVEVLTRQML
QRVRILDPGETDMLPGEVMDIGQFRDRNKEVIISGGIPATAQSVILGITKAALETNSFLS
AASFQETTRVLTDASIRGKNDPLLGLKENVIIGKIIPAGTGMPVYRNMEPQADVAKPQSV
YSIADIERQMKEKDEKDKATPQK
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataagtttgaaagtatgcaaattggtcttgcatcacctaacaagatc
agaagctggtcatatggtgaagttaagaagccagaaaccattaactaccgtactttaaag
ccagaaaaagatggtttgtttgatgaacgaatctttggtccaactaaagattggtcatgt
gcgtgtggtaaatataagggtgttagataccgtggaattatttgtgatcgatgcggtgtt
gaagttacttcttctaaagtaagaagagaacggatgggccacattgaattggccgcacct
gttactcacatttggtacttcaagggtattccatcaaaaatgggtcttgttttggatatt
tctccaagattgcttgaagaagttatctattttgcagcttatatcgtaattgatccaggc
gatacagatcttgaacctaagcaattattaactgaagctgaataccgtgagcaaaaagct
aagtacggcaatcgttttgaagcaaagatgggtgctgaagctatccgtgatttgcttaag
aaagttgacttagctaaagaagttgctgatttgaagaaagaacttcaaactgcaactggt
caaaaacgtacacgtgctattagaagattggacattttggacgcattcaagaactccggc
aataagccagaatggatggttatggatgctgttccagttattccaccagatcttcgtcca
atggttcaacttgaaggtggacgttttgccacttccgatttaaacgatttatacagacgt
gttatcaaccgtaacaatcgtctgaagagattgcttgatttgaatgctcctaatatcatt
gttcaaaatgaaaagcggatgcttcaagaagctgttgatgctttaattgataacggtcgt
cgtggtcgtccagttgttggaccaggtaaccgtccacttaagtcactttcacacatgctt
aaaggtaagcaaggtcgtttccgtcagaacttgcttggtaagcgtgttgactactcaggt
cgttcagttatcgatgtttcaccaaaattgaagttctatcaatgtggtgttcctcgtcca
atggctcttgaattgttcaagccatttgtaatgcatgaattagttaagcgtggtattgca
tcaaacattaagaatgctaaacgtaagattgatcgtgaagatgatgatatctgggatgta
cttgaagatgtaattaaggaacgtccagttcttttgaaccgtgcacctactcttcaccgt
ttgagtattcaagccttcgaaccagtattggttcctggtaagtcaattcgtttgcaccca
ttagcatgtgaagcttacaacgccgacttcgatggggaccagatggctattcacgttcct
ttgtcagatgaagctgttgctgaatctcgtttgttaatgcttgctgcgcaccatatttta
gctcctaaggatggtaagccaatcgttactccatcacaggatattgttttgggtaactac
tggttaactcaggctgaaaagggtcgtgaaggtgaaggcatgatctttacttcaccagct
gaagctgctgttgcttatgcaaatggtgacattcactaccatactattattggtatgtca
gctgattcaatgcctaagaagccatggccaaaaggtcacgaacacggtatctttattact
acttatggcaagattgtcttcaaccaaattttcccagatgattatttctacattaatgaa
ccaactgaggaaaacttgaataatcctttagatgctaagtacttcttagctgaaggcgaa
gacattcataagaagattgattcaattgcggatgatttgattgctactccatttaagaag
gacttcttatcagattcaattgctactgtatacaagtactacaaggttcaaagaacgtct
gaatacttggatgatttgaagaaattaggttacacaagttcaactacttcaggtatcact
attggtatgactgacgttccagaaattactgataaggatgaaaaggtagataaggcccac
aagcaagttgatattgtatctaaacaattcagaagaggtctgattactgagcaagaacgt
cacgaccgtgtaattagcatttggaacaagtgtaaagacgaagttcaaaatgaaattgca
caaatctatgacccaagaaacccaattacaatcatggccgactctggtgcccgtggtaac
atttcaaactttactcagttagctggtatgcgtggtttgatggctactcctaacggtggt
ttgttcgaaattcctgttacttcaaacttcaaggaaggtttgtcagtactagaattattc
atgtccactcacggtgctcgtaaaggtatgaccgatacggctttgaagactgcccagtca
ggttacttaactcgtcgtttggttgatgttgctcaggacgttattattcgtgatgatgat
tgtggtactgatcgtggtattacagttagcgccatcatggaaggtgacgaaatgatcgaa
ccattattcgatcgtttgcttggtcgtttcactgctgaaacagttaaggatcctaagact
ggtgaaactatcgtagctaaggacgtcatgatggacgaaaacttggctcacaaagtttgt
gatgctggtttaactcacgttaagattcgttcaatccttacttgtgatactcctcacggt
gtatgtcgtaagtgttatggtatgaaccttgctactggtgaagaagttgaagttggcgaa
gcggttggtactgttgccgctcaatcaattggtgaaccaggtactcagcttactttgaga
actttccacaacggtggtgttgccggtgctgaagatattactcaaggtttacctcgtgtt
caagaattatttgaagctcgtaaccctaagggtcgtgctacaatttctgaagttgatggt
attgttgattcaattcaagaaaacccagcagatcacacgcgtgaaattactgtaaagggc
aagattgatacaagatcatacgatgtcccttacactgcatctgttgctgtagctgaaggc
gatacagttcaccgtggtgacaagttgactcttggttcaattgatcctaaggaattgatt
caagtaactgatactttaacaactgaagaatacattttggctgaagttcaaaaagcttat
agaatgcagggtgtagatatttcagataaacacgttgaagtattgactcgtcaaatgttg
caaagggttcgtatccttgatccaggtgaaactgacatgttgcctggtgaagttatggat
atcggtcaatttagagaccgtaacaaggaagttattatttctggtggtattcccgcaact
gctcaaagtgtcatcttaggtattactaaggccgctttggaaactaatagtttcttgtca
gctgcttcattccaggaaactactcgtgttcttaccgatgcttctattcgtggcaagaac
gatccacttcttgggcttaaggaaaacgttattattggtaagattattccagctggtact
ggtatgcctgtttaccgtaatatggaaccacaagcagatgttgctaaacctcaatcagtt
tattcaattgccgatattgaaagacaaatgaaggaaaaagacgaaaaggacaaagcaact
ccacaaaagtaa
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integrated database retrieval system
