Lactobacillus amylolyticus: B1745_02205
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Entry
B1745_02205 CDS
T05057
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lamy
Lactobacillus amylolyticus
Pathway
lamy03030
DNA replication
lamy03410
Base excision repair
lamy03420
Nucleotide excision repair
lamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1745_02205
03410 Base excision repair
B1745_02205
03420 Nucleotide excision repair
B1745_02205
03440 Homologous recombination
B1745_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lamy03032
]
B1745_02205
03400 DNA repair and recombination proteins [BR:
lamy03400
]
B1745_02205
Enzymes [BR:
lamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1745_02205
DNA replication proteins [BR:
lamy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B1745_02205
DNA repair and recombination proteins [BR:
lamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B1745_02205
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1745_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
HHH_5
DUF3698
DUF61
Motif
Other DBs
NCBI-ProteinID:
ARD06520
LinkDB
All DBs
Position
424304..426967
Genome browser
AA seq
887 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVEPTHIL
VAFDAGKVTFRTKMYGEYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIG
TFAAKGEKNGFTTTVVTGDRDLTQLASHSTTVEVTKFGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDNSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDGA
EVEKVEYTVLNDDNVKDVKATEKDTVEFYLEMLGANYHLADFVGFSLKINDKIYVSRDVD
LLEEDNIKHILEDEKIKKNVFDLKRSMVGAHRLGIHTHGLDYDMLLASYLVNNENNSNDL
GEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIESLKKTLLEKLKDHE
QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYGQAGEKFNLN
SPKQLGHILFEKLGLPVIKKTKTGYSTAVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSEPDGYIF
SCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKRAKEFIDNYFEQYPQIRDYMDKAVQEAREKGYAETIMHR
RRYLPDIHAKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLEEMHLKTKMVLQVH
DELIFDVPKDELETVKKIVPEVMQSAVRLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaaattacttctaatcgatggtaactctgtagctttcagagccttttac
gctctttatcgtcaactagaatctttcaagagtccagacggcctgcacactaatgccatt
tatgcttttaagaatatgcttgatgtccttttgaaggacgttgagccaactcatattttg
gtagcttttgatgcaggaaaagtcacttttagaacaaaaatgtatggtgaatacaaaggt
ggacgtgcgaaaactccagaagagttgctcgaacaaatgccttacattcaagaaatgctg
catgacttggggattaaaacttatgaattgaagaattatgaagcagatgacatcattggt
acttttgctgcgaagggtgaaaagaatggtttcacaacaaccgttgtaactggtgaccgc
gacttaactcaacttgcttcgcattccactactgttgaagtgacaaaattcggtgtttct
caacttgaagcctacacacctgaacatatgaaggaagttaacggcgtcactccaactgaa
ttcattgatatgaaggctttgatgggggataattccgataattaccctggtgtaactaaa
gttggtcctaagactgcatcacgtttgattcaaaaatacggttccgttgaagggatttac
gatcatatcgacgaaatgaagaagtccaagctgaaagaaaacttgatcaacgataaggac
aaagcatttttagctaaaaagttagcaactattgaccgtgattcaccggtaactctggat
attgatgatataaaacgtcagccagttgattatgaaaagctgcgtcaattctatgaaaag
atgaacttccgtaagttcttagctgacctaaatgcttcaggtgccggtcaagatggtgcc
gaagttgaaaaagtagaatacactgttttaaacgatgacaacgttaaagatgttaaagcc
actgaaaaagacactgttgaattttatctagaaatgctcggcgctaattaccacttagca
gattttgtcggctttagcttgaagatcaacgacaagatttatgtttcaagagacgtggac
ttgcttgaagaagacaatatcaagcacatcttagaagatgaaaagatcaagaagaacgtc
tttgacttaaagagatccatggttggggcccatcgtttaggcattcatacgcacggcctt
gattatgatatgcttttagcctcatatctagttaataatgaaaacaactctaatgatctt
ggtgaaattgcccatctttatggggattattccgttaagactgaccttgaagtctacggc
aaaggtaagagtgaacacatccctgatgacgatgatgaattattcaaccacttagcttct
aaggtcaacgccattgaatcactcaagaagactttgcttgaaaagcttaaagaccacgaa
caagatgccttgtttgatacgatcgaaatcccaaccgcgcgcgttttagccagaatggaa
atgaacgggatgaaggtcgaagcaagtactttaattcaactgcaaaatgaatttgccgtt
aaattgaaagaactcgaagacaagatttatggccaagccggtgaaaagttcaacttgaac
tcaccaaagcaattaggtcacattttgtttgaaaagcttggtttgccagtcatcaagaag
accaagactggttattcaactgcagttgaagtacttgatcaattgaagacgcaaagccca
atcgttagcgaaattttggactatcgtcaaattgccaagattcaatctacctatgtaaag
ggtctgcttgacgtcattcaaccagatggccgcgtgcacacacgttacttgcagactttg
actgcaactggtcgactttctagtgtggatcctaacttgcaaaacatccctacccgcacc
gaagaaggaaagcaaatcagaaaggccttcgtgccaagtgaaccagacggctacatcttc
tcttgcgactattcacaagttgagcttcgtgtcttggcccatgtttctggtgatcaaaac
atgcaagaagccttcaagaccgggtatgacatccactcacacaccgcgatgaagatcttc
cacttggattcacctgatcaggtaacgccactgatgcgtcgtcatgccaaggcagttaat
ttcggaattgtttatggaatttccgattacggcctttcaaagaatttaggtatttcaaga
aaacgagctaaggaatttattgataattactttgaacagtatccacagattcgtgactac
atggataaagcagttcaagaagcacgtgaaaaaggctatgctgaaaccatcatgcaccgc
cgtcgctatttgcctgatatccatgctaagaacttcaatgtcagaagttttgcggaaaga
acagcaattaattcaccaattcaaggttcagctgcagatatcatcaagattgcgatgatt
aatatgcaaaagaagcttgaagaaatgcacttgaagaccaagatggtgttacaggttcac
gatgaattgatttttgatgttcctaaagatgaattagagacagtgaagaaaatcgtgcca
gaagttatgcaatctgccgtcagacttgatgtgccactaattgctgactctggttggggt
cataactggtacgatgcaaagtag
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