Lactobacillus amylolyticus: B1745_03995
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Entry
B1745_03995 CDS
T05057
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lamy
Lactobacillus amylolyticus
Pathway
lamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B1745_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lamy03400
]
B1745_03995
Enzymes [BR:
lamy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B1745_03995
DNA repair and recombination proteins [BR:
lamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B1745_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
UvrD_C
AAA_22
RsgA_GTPase
nSTAND3
UvrD-helicase
DEAD
AAA_28
AAA
SLFN-g3_helicase
T2SSE
NTPase_1
DUF4314
AAA_29
NPHP3_N
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
ARD06847
LinkDB
All DBs
Position
complement(793544..795898)
Genome browser
AA seq
784 aa
AA seq
DB search
MVKFTGKVNGIVFENDQDMFKILDVEILGKLEGYPRDEIKVTGSFGEIQIAGRYQFDGRL
IMHDKFGLQFRSDSYQQVMPHEEGSLTKYLSSNKFPGIGLKAAGKIIDELGINALDVLKN
NPAKIDTLALTQKQKDSLLSGINSMDSFSEIILKLAQYGVKKKVATRLYQFYHGEALKKL
QQNPYAAIAEVQGYGFKTADIIGRELNIKADDPKRIQGAVYQVLIDALTSSGDTYVGLAE
LLTESSKMLDISAFDPIAKEVNTLQKNGKVVVDGENAAISNIYETEVNIARTLKNLVQRR
QDQHDETYSDSEMEDAIEEAEKKLKIKYDDTQKAAIKNALNNPVSILTGGPGTGKTTIIN
GILLSLRQLADIPASALYSEDPPFLLAAPTGRAAKRMGEITGIAAKTIHRLLGLGIGETD
EAELNELNGEILIIDEMSMVDMFLFKQLVSSINQTRHIVFVGDKDQLPSVGAGNVFSDLI
KSHAFPTTILKQIHRQGDDSTIITLAHDVNDGKNQDELFKKTKNYSFIPCQPQLVGDAVG
QIVKLALKRGFSKDDIQVLGAMYHGNGGIINLNDILQEIMNPPKAKSKQVEAHNENFRIG
DRVLQLQNNPEKDIYNGQIGKVVGIDDHSSDKCLIANFDEREVEFNKKDLSDLTRAYAIT
IHKSQGSEFPLVVLNLTMQNYVMLKRNLLYTAITRAEKNLVLVGEPRAYITALNTPGNDR
KTGLTAKLQKELKVDQSNDDAAKTAKKLPPKSAEQEDYILTKEKIYSGEIDPMIGMQDIS
LKAR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatttacaggaaaagtcaacggcattgtctttgaaaatgatcaggatatgttc
aaaatccttgatgtagaaatacttggcaaacttgaaggctatcctcgtgatgaaataaag
gtcactggcagctttggcgaaatccagattgcaggacgctatcaatttgatggtcgcctg
attatgcatgacaaattcggcctgcaatttcgttcagatagctatcaacaagtgatgcca
catgaggaaggcagtttgaccaaatatttaagttcaaacaaatttcctggcatcggctta
aaagctgcaggaaaaattattgatgaacttggaattaatgccttggatgttttgaaaaat
aatcctgctaagatcgatactttggccttaacgcaaaagcagaaggacagtcttttatca
ggaattaattcaatggactccttttcagagataattttaaaattagcccaatatggcgtt
aagaagaaggttgccactcgtctatatcagttctatcatggcgaggccttaaaaaagctg
cagcaaaatccctatgcagcgattgctgaagtgcaaggctatggctttaaaacggcagat
atcattggtcgtgaattaaatattaaggccgatgatcctaagagaatccaaggggcagtt
tatcaagttttaattgatgctttaaccagcagtggcgatacttatgttggattagctgaa
ttgttaactgaaagcagtaaaatgcttgatatttcggcctttgatccaattgctaaagaa
gtaaatacgctgcaaaagaacggtaaagttgtcgttgatggtgaaaatgcagctatatct
aatatttatgaaactgaagtaaatattgcccgaacgctaaaaaatttagtacaacgccgg
caagaccagcatgacgaaacatactctgatagcgagatggaagatgctattgaagaagcc
gaaaaaaagttaaaaatcaagtatgatgatacacaaaaggctgcaatcaaaaatgctttg
aataatccagtttcgattttgacaggtggtcccggaactggaaaaacaacgattattaac
ggtatcttgctgtctttacggcagttggccgatattccagcttctgcattatacagtgaa
gacccaccgtttttactagctgcaccaacaggcagagcagctaaaagaatgggtgaaatc
accggcattgctgcaaaaactattcaccggttgcttggtctaggaattggcgaaactgat
gaagccgaactcaacgaattgaatggagaaattttaattattgatgagatgtcaatggtt
gacatgttcctgtttaagcaattggtctctagcatcaatcaaactcggcatatcgtcttt
gttggagataaggatcagctgccatcagtcggagctgggaatgtttttagtgatctgatc
aaatcacatgcttttccaacaacgattttgaaacaaattcaccgtcaaggcgatgattcg
acgattattaccttagcccatgacgtaaatgacggcaaaaatcaggatgagctgttcaag
aaaaccaaaaactattcatttatcccttgtcagccgcaattagtcggagatgctgtcgga
caaattgtcaaattggcgttaaaacgggggttttctaaagatgatattcaagtcctcggt
gcaatgtatcacggcaatggtggcattattaatttgaatgatattttgcaggaaattatg
aatccaccaaaagccaaaagcaaacaggttgaggctcataacgaaaatttccgtattggt
gatcgagttttgcagctgcagaacaatcctgaaaaagacatttacaacggacagattggt
aaagtcgttggcattgatgatcacagttccgataaatgtttgattgccaattttgatgaa
cgtgaggttgaatttaataaaaaagacctgtctgatttgacacgggcttacgcaattact
attcataaatcacaagggtctgagtttccgctggtagttttgaatttaactatgcaaaat
tacgtcatgctaaaaagaaatcttctttatacagcaattacgcgagcggagaagaatctc
gtgctagtaggtgagccgcgagcatatattacggctttaaatactcctggcaatgatcga
aagaccggcttaactgcaaagttgcaaaaagaactgaaagttgatcagtcaaatgatgat
gctgcaaaaactgcaaaaaagctgccaccaaaatcagcagaacaagaagattatatttta
actaaagaaaaaatctattcaggtgaaattgatccaatgattgggatgcaggatattagc
ttaaaagctcgttaa
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