Lactobacillus amylolyticus: B1745_04720
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Entry
B1745_04720 CDS
T05057
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lamy
Lactobacillus amylolyticus
Pathway
lamy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1745_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lamy03400
]
B1745_04720
DNA repair and recombination proteins [BR:
lamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1745_04720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B1745_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
nSTAND1
nSTAND3
AAA_29
AAA_22
AAA_21
AAA_33
AAA_18
AAA_23
AAA_14
AAA_24
APS_kinase
DnaJ_CXXCXGXG
AAA_25
AAA_15
SLFN-g3_helicase
NACHT
Viral_helicase1
cobW
DUF1924
RNA_helicase
Mtrc-MtrF_II-IV_dom
T2SSE
NTPase_1
PRK
Septin
MeaB
Dynamin_N
DUF87
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ARD06976
LinkDB
All DBs
Position
complement(925949..928804)
Genome browser
AA seq
951 aa
AA seq
DB search
MANDQIVIRGAREHNLKDVNLTIPKNKLVVVTGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIDGLNPAISINQKTTSHNPRSTVGTVTEINDYLRLLWARVGTP
ICPNDGTVIERQSVDQMVDRIMALPERSKIQLFAPVIRDKRGEHKEVFKRVQRAGYVRVV
VDGEMHEIGEDFSLKKNKRHSIDIVVDRLIVKPSIRSRLFDSVEAALRLSDGYMNVDVIG
GKMLNFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPACDGLGMKLSVDEDLVIPDKSKT
LAEGALIPWKNSKYYSGMLEQACAALKIPMDKPFNKLTQHQKETILFGSKKAIKFHLTGD
FGVNDTTQPFEGIMVNIDRRYRHPMSKFMRDAMGKYMTELTCATCHGKRLNEKALAVKID
GKDIAEASDLSIDKALKFFKQLKLNEQKTTIARPILKEVRDRLSFLVSVGLDYLTLSRSA
DTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIKSLKRMRDLGNSLIVV
EHDDETMRQADYLVDMGPGAGIYGGKVMAAGTPQEVEKNPNSLTGQYLSGKKFVPVPLKR
RKGNGKKITIKSAAENNLKNINVDFPLGKLIVVTGVSGSGKSTLVNMILKRALAQKLNHN
STKPGKFKSITGYKNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRALFAQTNEAKMRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCEVCHGTRYNSETLEVTYREKNIA
QVLDMTINEATEFFKNIPKIERKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLMNVLQRLVDEGNTVLIIEHNLDVIKCADWLIDLGP
EGGDGGGMVVATGTPEEIAEVKESYTGQYLAPVLKRDTELTKEAKKSNKTK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgatcaaatcgtaattcgtggtgctcgcgagcacaatcttaaagatgtgaat
ttaacaattcccaagaataagctagttgtggtaacgggcttatctggttcaggcaaaagt
tctttagcttttgataccttatatgcagaaggaagacggcgttatgttcagtctctttcg
agctatgcgcggcaatttttaggacaaatggataagccagatgttgattcaatcgatggt
ttaaatcctgcaatttccatcaaccaaaagacgacatcgcataatcctcgttcaacagtt
ggtacggttacagaaatcaatgattaccttcgcttgttgtgggcaagagttggcacgcca
atttgtccaaatgatggtactgtgatcgagcgtcagagtgtggatcaaatggtcgaccgc
atcatggctttgcctgaacgcagcaaaattcaattgtttgcaccagtcattcgtgacaag
cgcggtgagcataaggaagttttcaaacgggttcaacgtgctggttatgtgcgcgtggtt
gtcgatggagaaatgcatgaaataggcgaagatttttctcttaaaaaaaacaagcgccac
tcaatcgatatcgtagttgatcgtttaatcgttaagccaagcattcgttcacgcctgttt
gattcagttgaagctgcattgcgtttgtctgatggctatatgaacgttgatgtgattggt
ggcaagatgcttaacttttctgagtactatgcttgtccaaaatgtggctttacagtgggt
gaaatggaaccacgattattttcatttaatgccccattcggtgcttgtccggcctgtgat
ggtttagggatgaaactttcagttgatgaagatttagttatccccgataaaagcaaaact
ttggcagagggtgcacttattccctggaagaattccaaatattatagcggcatgttggaa
caagcctgtgcagctttgaaaattccaatggataagccgtttaataaattaacccaacac
caaaaagaaacaattttatttggttcaaaaaaggccattaaattccatttaacaggcgat
tttggcgttaatgataccacacagccatttgaaggaatcatggtcaatattgatcgacgc
tatcgccacccaatgtcaaaattcatgcgggatgcgatgggcaaatacatgacggaatta
acctgtgcgacctgtcatggcaagcgtttgaatgaaaaagctttggctgtaaagattgat
ggcaaggacattgctgaagcctcagatttatcaatcgataaagcacttaaattctttaag
cagctaaagttaaatgagcaaaagaccacgattgcacgaccgatcttgaaagaggttaga
gatcgtctttccttcttggtgagcgttggacttgattatctgactttgtcacgttctgct
gatactttgtctggtggtgaggcacagcgaatcaggttagccacccaaattgggtctaac
ttgtccggcgttatgtatgtgctagatgaaccttcaattggtttgcaccagcgtgacaat
gatcgtttgatcaagtctttgaaacgcatgcgggatttgggcaattcgctgattgttgtt
gaacacgatgatgaaactatgcggcaggccgattatttggttgatatgggtcctggtgct
ggtatatatggcggcaaggtgatggctgctggtaccccgcaagaagttgaaaaaaatcct
aattctttaaccggccaatatctttctggcaaaaagttcgtacctgttccgcttaaacgc
cgtaaaggcaatggcaaaaagatcacaatcaagagtgcagctgaaaacaatttaaaaaat
atcaatgttgattttccacttggaaaactgatcgtggtgacaggtgtttctggttcaggc
aaatcaactctggttaatatgattttgaaacgggctctagcacaaaagctaaatcataat
tcaactaaaccaggtaaatttaagagtattactggatataaaaatatcgaaaaaattatt
gatattgaccagagcccaattggcagaacgccacgcagcaatccagcaacttatactagc
gtattcgatgatattagagcgctgtttgcgcaaaccaatgaagcaaaaatgcgcggctat
accaaggctcgcttttcattcaatgttaaaggtggtagatgtgaagcctgtcatggtgat
ggaattatcaagattgagatgaactttttaccggatgtttatgtgccttgcgaggtctgc
catggtacgcgttataactctgaaacgctcgaagtaacttaccgtgaaaagaatattgcc
caagtgttagacatgacaatcaacgaagcaacggagtttttcaagaacattccaaaaatt
gaacgcaagctgcaaactattgtcgatgtaggtctgggctatgtaaaacttggtcagtct
gcaactactctttccggtggtgaagctcaaagaatgaaactggctgccgaattgcaaaaa
ctgtcgacaggcaaaaacttctatattctggatgaaccaacgactggtctgcatacagat
gatataaaacgcctgatgaatgttctccaacgtttggttgatgaaggaaacaccgtttta
attattgaacacaacttagatgtgattaagtgtgcggactggctgattgatcttggacca
gaaggcggcgatggcggcggcatggtcgtagctaccggaacgccagaagaaatagcagaa
gttaaagaaagctataccggccaatatcttgctcctgttttaaagagagacactgaattg
acaaaagaagctaagaagtcaaataaaacaaaataa
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integrated database retrieval system
