Lacinutrix sp. 5H-3-7-4: Lacal_0884
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Entry
Lacal_0884 CDS
T01533
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan01501
beta-Lactam resistance
lan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lacal_0884
01503 Cationic antimicrobial peptide (CAMP) resistance
Lacal_0884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lan03036
]
Lacal_0884
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lan02000
]
Lacal_0884
01504 Antimicrobial resistance genes [BR:
lan01504
]
Lacal_0884
Chromosome and associated proteins [BR:
lan03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Lacal_0884
Transporters [BR:
lan02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Lacal_0884
Antimicrobial resistance genes [BR:
lan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lacal_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_3
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AEH00732
UniProt:
F6GF95
LinkDB
All DBs
Position
complement(1025056..1026195)
Genome browser
AA seq
379 aa
AA seq
DB search
MKTNRIISILTIASVFLALASCADNKNAQAAAAKQQQALPFPVTQLQTKTVTGYTEYPTT
IEGKVNSDVRAKTSGYVEKVYVDEGQKVRKGQVLFKLETQSLSQDAGAAKAQVNVAQVEV
DKLIPLVEKNIISPVQLETAKANLAQAKANYSGVTANIGYATIKSPIDGFVGAINFREGA
LISPSDATPLTTVSQIDEVYAFFSFNEAQYIDHLQRAEGQNKAERIKNSPDLTLVLANGK
EYSEKGRIQTSTGQINQSTGTIQIRAAFDNPNEILTNGNSGKIKFPIEYKDAIVVPQTAT
FEQQGNIMIFKLGENNKVETSILKVKGTVDNLYVVESGVAPNDKIVVSGIGKLRSGMAIA
PQETSFEEAIKPVATLFRN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaatagaataatttcaatattaaccatagctagtgtctttctagctttagcc
agctgtgccgacaataaaaatgcacaagctgccgcagcaaaacagcaacaagctttaccg
tttcctgttacacaattacaaacaaaaaccgttactggttatacagagtatccaacaact
attgagggaaaagtaaatagtgatgttagagcaaaaacttctggctatgtagaaaaagta
tatgtagatgaaggtcaaaaagtacgcaaaggacaagtgttatttaaactagaaacacaa
tcgttaagtcaagatgctggtgcagcaaaagcacaagtaaatgtagcacaagttgaggtt
gataaactaattcctttagtagaaaaaaacattattagtccagtgcagttagaaactgca
aaagcaaatttagcacaagctaaagctaattatagtggtgtaactgcaaatatcggttac
gctaccattaaaagtccaattgatggttttgttggagccattaattttagagaaggtgct
ttaattagcccaagtgatgcaacaccactcacaactgtaagtcaaatagacgaagtctat
gctttttttagttttaatgaagcacaatacattgatcacttacaacgtgcagaaggtcaa
aacaaagcagagcgtattaaaaattcgccagacttaactttagttttagcaaatggtaag
gagtattctgaaaaaggacgtattcaaaccagtacaggacagattaaccaaagtacaggt
actattcaaattagagcagcttttgataatccaaacgaaattttaaccaacggaaacagt
ggaaaaattaaatttccaatagagtataaagacgctattgttgtaccacaaactgcaact
tttgagcagcaaggtaatattatgattttcaaattaggagaaaacaataaagtagagact
tctattttaaaagtaaaaggtactgtagataacttatatgttgtagagtctggtgtagca
ccaaacgacaagattgtagtatctggtattggaaaactaagaagcggtatggcaattgcg
cctcaagaaacttcatttgaagaagctattaagccggttgcaacattatttagaaattag
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