Lacinutrix sp. 5H-3-7-4: Lacal_2973 Help Entry Lacal_2973        CDS       T01533                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lan  Lacinutrix sp. 5H-3-7-4 Pathway lan03030   DNA replication lan03410   Base excision repair lan03420   Nucleotide excision repair lan03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lan00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Lacal_2973    03410 Base excision repair     Lacal_2973    03420 Nucleotide excision repair     Lacal_2973    03430 Mismatch repair     Lacal_2973  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lan03032]     Lacal_2973    03400 DNA repair and recombination proteins [BR:lan03400]     Lacal_2973 Enzymes [BR:lan01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Lacal_2973 DNA replication proteins [BR:lan03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Lacal_2973 DNA repair and recombination proteins [BR:lan03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Lacal_2973    NER (nucleotide excision repair)     GGR (global genome repair) factors      Lacal_2973    MMR (mismatch excision repair)     DNA ligase      Lacal_2973   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Lacal_2973 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia HHH BRCT_2 PTCB-BRCT Auto_anti-p27 Zn_ribbon_6 Motif Other DBs NCBI-ProteinID:  AEH02811 LinkDB All DBs Position complement(3287976..3289973) Genome browser AA seq 665 aa AA seqDB search MSKKQEIEQLRQELREHNYNYYVLDNPTISDYDFDIKLKELQALEEAHPEFFDANSPTLR VGGEVTKNFNTVVHEHRMYSLDNSYSLEDLKDWETRIKKLVDGDISYTCELKYDGASISL TYENGNLLKAVTRGDGFQGDEVTANIKTIKSVPLQLKGDYPAKFDIRGEIVLPFKGFLKM NEERVANGEEPYKNPRNTASGSLKLQDSGEVAKRPLECLLYNLTGTNLGVENQFESLEKA RKMGFKVPNEARLCKTIDEVFKFINHWDTERHNLPYETDGVVVKVNSLYQQEELGYTSKA PRWAMAYKFKAEQVSTILKEITYQVGRTGAITPVANLEPVDLAGTVVKRASLHNADQIEK LDIRINDTVFVEKGGEIIPKIIAVDLTQRLQDSKPTKYATHCPECQTPLERLEGEAKHFC PNYNGCEPQVIGRIQHFISRKAMDIEGLGGETVGLLVKEGLITNYADLYTLTKAQILPLE RMAEKSAENLINGIEASKQISFERVLFAIGIRFVGETVAKKLAKHYKSIEALEQASIEDL EKVDEIGIKIAESVVSFFASEENRNIIKRLKNVGVQLEISAEKLANQTNKLKGKSFVVSG VFTKVSRNELKKLIEDNGGKNVSSISSKTDFVVAGDKMGPSKKEKAEKLNISLITEDEFL QMVDL NT seq 1998 nt NT seq  +upstreamnt  +downstreamnt atgagtaaaaagcaagaaatagaacaactacgtcaagaacttagagagcataattataat tattatgtattagataacccaactataagtgattacgattttgatattaaattaaaagaa cttcaagctttagaagaagcacatccagaattttttgatgcaaactcaccaacattacgt gttggaggagaagtaacaaaaaattttaatacagtagttcatgagcatcgcatgtactca ttagataattcatattctttagaagacttaaaagattgggaaacaagaattaaaaaatta gttgatggcgatattagttatacttgtgagttaaaatacgatggtgcatctataagtcta acctacgaaaatggaaatttattaaaagcagtaacacgtggtgacggttttcaaggcgat gaggttaccgcaaatataaaaaccataaaatctgtaccattacagttaaaaggtgattac ccagcaaagtttgatattcgaggagaaatagttttgccttttaaagggtttttaaaaatg aatgaagaacgtgtagcaaacggagaagaaccttataaaaaccctaggaatacagcatca ggaagtttaaagcttcaggacagtggagaagtagcaaaacgtcctttagaatgtttgttg tataatttaacaggaacaaatctaggcgtcgaaaatcaatttgaaagcttagaaaaagct agaaaaatgggatttaaagttcctaacgaagcacgtttgtgtaaaactatagatgaggtt tttaagtttataaatcactgggatacagaacgtcataacttaccttatgaaacagatggt gttgtagtaaaagtaaatagcctataccaacaagaagaattaggttatacctcaaaagca ccaagatgggcaatggcttataaatttaaggcagagcaagtgtctactattttaaaagaa attacctatcaagtaggaagaacaggcgcaataacgccagtggcaaatttagaacctgtg gatttagcaggtacagtagtaaaacgagcatcgttacataatgcagatcaaatagaaaaa ctagatataagaataaacgatactgtttttgtagaaaaaggaggagaaataattcctaaa attatagctgtagatttaacgcaaaggcttcaagattctaagccaaccaaatacgcaaca cattgtccagagtgtcaaacacctttagaaaggctggaaggagaagcaaaacatttttgt ccaaattataatggttgcgaacctcaggtaataggtagaatacaacactttatttctaga aaagcaatggatattgaaggcttaggtggtgaaactgttggtttattggttaaagaaggt ttgataacgaattatgctgatttgtacacacttacaaaagcacaaattttaccattagaa agaatggcagaaaaaagtgcagagaatctaattaatggtattgaagcttcaaaacaaatt tcatttgagcgcgtgttatttgcaataggaattcgttttgtaggagaaacagtagctaaa aaactggctaaacattataaaagcatagaagctttagagcaggcatcaattgaagattta gaaaaagttgatgaaataggaattaaaatagccgaaagtgttgtttccttttttgcttca gaagaaaatagaaatattataaaacgtctaaaaaatgttggcgttcagcttgagatttca gccgaaaaattggcaaaccaaaccaataaattaaaaggaaaatcgtttgttgtttctgga gtgtttaccaaagtttcacgtaatgaactaaaaaaactaattgaagataatggtggtaaa aatgtaagttctatttcatctaaaaccgattttgttgttgcaggagataaaatggggcca agtaaaaaagagaaggcagaaaagcttaatatatctcttattacagaggatgagttttta caaatggttgatttgtaa

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