KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109331513
Entry
109331513         CDS       T04664                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109331513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lang03021]
    109331513
Enzymes [BR:lang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109331513
Transcription machinery [BR:lang03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109331513
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 EF1G RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 109331513
NCBI-ProteinID: XP_019421599
LinkDB
Position
LG17:complement(3387914..3408567)
AA seq 1486 aa
MEKDLFQEQKLPQGLIKAIKFDVLTEADIDKMVALEINAAGQVSCSDLGLPNLSSECTTC
GAKSSDKNSCEGHCGMIKFPFGILHPYFMSEIAQILNKICPGCKSIRRELQNKAAQILSG
VKQLNGCKYCSGSFMVRYPTMKFRVSSNDLYRRTAIIAEVNDKAPKKKTFGLGLPDDYWD
IIPADAQQEDGCTKSNRMVLSPAQVYSLLADVDPNFITKFVPRLDLLGLNYFPVTPNCHR
VTEFAHAFCNGNRLSFDDRTRNCKKLVDFRGTANELSSRVLDCLRISKLNPDKIPSNNIF
ADIQKRRVGENACNSSGLRWMKDVVLGKRNSSSFRTVVVGDPDLELSEIGLPCQIAESLE
VCEHVNRQNKKKLLDCCELRMLEKGHISVRRKGSPIKLYKKEALKIGDIIYRPLTDGDKV
LINRPPSIHQHSMIALSVRVLPISNVVSINPICCSPLRGDFDGDCLHGYIPQSVSARVEL
SELVDLDRQLINGQSGRNLLSLSQDSLTAAYLLMEDEALLNVYEMQQLQMFCPYKLTLPA
IVKAPSSNSSFWSGKQLFSMLLPSKFDYSFPPDDVFVRDGELISSSEASGWLRDSDCNVF
QSLLYHFKEKTLDFLYAAQKALCEWLSMTGFSVSLSDLYLSSDSYSRKNMMEEISYGLQA
AEEACNFKQLLVDDYCDFLSGNLQDITVKVDRLNHERQISASLSQVSVDAFRQVFRSIQS
LADKYACKSNTFLAMFKAGSKGNLQKLVQHSMCLGLQHSLVRLSYRIPRQLSCAAWNRQK
RLDSIKKYLGTPQSVQSYIPYAVVENSFMTGLNPLECFVHSVTNRDSSFSDNADLPGMLT
RRLMFFMRDLYDAYDGTVRNLYGSQVIQFAYDADKDSSSDSCYQDYTTGGEPVGALSACA
ISEAAYSALGQPISLLEASPLLNLKNVLECGSKKKGGDQTVSLFLSKKLGKQRNGFEYAA
LEIKNYLERMMFSDIVSTVMIIFSQPSCSHEKYSPWVCHFHLDKEIVKRRKFTMHSIIDS
LYQRCDTLRKESKVNLPNLIISSKKCSANKGKEGEDCVTVTIVENSEDLIQVDAVRDLML
PLLLGTAIKGFLDITKVNILWSNLSKVSNSSNRSFGGELYLKVTMSSDGGSGRFWGVLIN
HCHKIMHMIDWTRSHPDNIHHFCSAYGINAGWQYFLHSLASATSDTGKTILPKHLRLVAN
SLSASGEFVGLNAKGMTRQRQHASVASPFVQACFSNPGRCFIKAAKCGVKDNLRGSIDAL
AWGSCPSIGTSGQFDILYADKGQELAKSVDVYNLLEASFDQLNEKIDTPDARSYSSDKCG
SGYRYKNGGYTMKQFKQAKSSIRNFVTVKDIQKLTYASSSILNNYLIDQQLSDRDLSTML
RVLHFHPHKDKKFGTGPQCIKVGQHPIYKDTRCFFIERTDGTVEDFSYRKCILGALEIID
PEKAKSQKKRWSGDNVENEKSQIKIWSGDNVEMAKSPKKRWWENNV
NT seq 4461 nt   +upstreamnt  +downstreamnt
atggagaaagacctctttcaagagcagaaattgccacaaggtctcataaaagcaatcaag
ttcgatgtcttaactgaggcagatatagataaaatggttgctttggagataaatgcagct
gggcaggtcagctgttctgacctgggactcccaaatttatcttcggagtgcactacatgt
ggtgctaaatcttccgataaaaattcttgtgaaggtcattgtggaatgatcaaatttcct
tttggcatactacacccatatttcatgtcagagattgcacaaatcttgaacaaaatttgc
cccggatgtaaatctattcgacgagaattacagaacaaggctgctcaaattctctctgga
gtcaagcagcttaacggttgcaaatattgttctggaagttttatggttcgctatccaaca
atgaaattcagagtttcctcaaatgacctctacagaagaactgcaattattgctgaggtt
aatgataaggctccaaagaagaaaacttttggtctaggattacctgatgattattgggat
attattcctgcagatgctcaacaagaagacggttgtacaaaatcaaatagaatggtttta
tcacctgcccaggtttattctttgttggctgatgttgatccaaactttattacaaaattt
gttccacgattggatttgcttggtctcaactacttcccagtgacaccaaattgtcatcgt
gtgacagaatttgcacatgcattttgtaatgggaaccggttgagttttgatgacaggacc
agaaattgtaagaaattggttgatttcaggggtacagctaatgagttaagttctcgcgtt
ttggattgcctgaggatctctaagttaaatcctgataaaataccaagtaataatatcttt
gccgatattcagaaaagaagagttggtgaaaatgcttgcaattcatctggtttgagatgg
atgaaagatgtggttcttggaaaacgtaatagtagttcattccgtactgtggtcgtcggt
gatccagaccttgagcttagtgagattggattaccttgtcagattgcagaaagtttggag
gtttgtgaacatgtaaacaggcagaataagaaaaaattgcttgattgttgtgagttacgc
atgttagagaaggggcatataagtgtccgcagaaagggtagtccaattaaattgtacaaa
aaggaagctcttaagataggagacataatttataggccccttactgatggggataaagtg
ctgataaataggcctccttccatacatcaacattccatgattgccctctcagttagggtc
cttccgatatctaatgtggtatctattaacccaatctgctgttccccactgcgtggtgat
tttgatggtgattgtcttcatgggtatattccacagtcagttagtgctagagttgagctt
agtgagctagttgatttagataggcaattgattaatgggcaaagtggtagaaatctgctt
tcactttctcaggatagtttaactgctgcttatttgctgatggaagacgaggctcttttg
aatgtttacgaaatgcagcagcttcaaatgttttgcccttacaagttaacacttcctgcc
attgtaaaagctccttcaagtaattcctcattttggagtggcaagcaattgtttagcatg
ctcctgccttcgaaatttgactactcttttcctccagatgatgtttttgttagagatggg
gagcttatatcttcctccgaagcttctggctggttacgtgattcggactgcaacgttttc
cagagtcttttgtaccattttaaagagaaaactctggactttttgtatgctgcacagaaa
gctctttgtgagtggttgtctatgacaggttttagtgtttccctgtcagatttgtacctc
tcttctgactcctattcgcgaaaaaatatgatggaggaaatctcatatggtttacaagca
gcagaagaggcatgcaacttcaaacagttactagtggatgattattgtgattttctgtca
ggaaatcttcaagatattactgttaaagtggatcgtctgaatcatgaaaggcaaatatct
gcttctctgagtcaagtgtctgttgatgcttttagacaggtttttcgaagtattcaaagt
ttagctgacaaatatgcatgcaagagcaatactttccttgctatgtttaaggctggaagc
aagggtaatttacagaagctagtgcaacattcaatgtgtcttggcctgcagcattctctg
gttcgtttgtcatacagaattccccgccaactttcttgtgctgcttggaataggcagaag
aggcttgattcaatcaagaagtatttaggaactcctcaatctgtccagtcttacattccg
tatgctgtggttgaaaactcttttatgactgggctaaatccacttgaatgttttgttcat
tcagtgacaaaccgtgatagctctttcagtgacaatgcagatcttcctggaatgctcaca
cgtagacttatgtttttcatgcgtgatttgtatgatgcatatgatggaacagtgagaaat
ttatacggtagtcaagttattcaatttgcttatgatgctgataaggactcatcttccgat
agctgttaccaagactataccacgggtggcgaaccagttggagcactttctgcttgtgcg
atttctgaggctgcatatagtgctttgggtcagccaatcagtctgcttgaagcatcacct
ctgctaaatttaaaaaatgttctagaatgtggttcaaagaaaaaaggtggtgatcagacc
gtttcattattcttgtccaagaaacttggtaaacaaagaaatgggtttgagtatgcagcc
ttggaaattaagaattatttggaaaggatgatgttctcagacattgtttctactgtaatg
ataatatttagccagccgtcttgcagccatgaaaagtatagtccttgggtttgccatttc
catctagacaaggaaattgtaaagagaagaaaatttacgatgcattctatcattgactct
ctttaccagagatgtgacacgttaagaaaagagtcaaaagtcaatcttcccaatttgata
atatcaagcaagaagtgttctgcaaataaaggaaaggagggagaggattgtgtcactgtt
acaattgttgaaaactctgaggatttgatacaagtggatgctgttcgggacttgatgtta
cctttgcttcttggaacggctataaaaggatttctggacatcacgaaggttaatattctc
tggagtaatctgtcgaaagtatcaaattctagtaaccgttcttttggtggcgaactgtac
ttgaaagttactatgtctagtgatggcggcagtggtagattctggggtgtactcataaac
cattgtcacaagataatgcatatgattgactggacacgaagtcatcctgataacattcat
catttctgctcagcctatggaatcaatgcaggctggcaatattttctccatagtttggca
tctgctacatctgataccggcaagacaatccttccgaagcatttgcgtcttgttgccaat
agtctgtcagctagtggagagtttgttggattaaatgccaagggcatgacacggcaaaga
caacatgcatctgttgcgtcaccctttgtgcaagcatgcttttctaatccaggtagatgt
tttataaaagctgctaagtgtggagtcaaggacaacctccggggcagcatagatgcattg
gcttggggaagctgtccgtccatagggacaagtggacaatttgatatcttatatgcagat
aagggacaagagcttgctaaatctgtggatgtgtataaccttcttgaggccagttttgac
cagctgaatgaaaagattgatacacctgatgctcgcagctattcatctgacaaatgtggt
tctgggtatagatataaaaatggtggttataccatgaaacagtttaagcaggcaaaaagc
agtataagaaatttcgtgactgtaaaggatattcagaagctgacttatgcatcaagttcc
atactgaacaattatttgattgatcagcaactaagtgacagggacctgtcaacaatgctt
cgggttttgcattttcacccgcataaagataagaagtttggcactggaccacagtgcata
aaggtcggacagcatcctatatataaggatacccgctgctttttcatagaacgaactgat
gggactgttgaagatttttcgtaccgcaagtgcattcttggtgctcttgagattattgac
cctgaaaaggctaagagccagaagaaaagatggtcaggagataatgttgaaaatgaaaag
agccagataaaaatatggtctggagataatgttgaaatggcaaagagcccgaagaaaaga
tggtgggaaaataatgtgtaa

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