Lupinus angustifolius (narrow-leaved blue lupine): 109354287
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Entry
109354287 CDS
T04664
Name
(RefSeq) 5'-3' exoribonuclease 4-like
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
109354287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109354287
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
109354287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
109354287
NCBI-ProteinID:
XP_019452218
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All DBs
Position
LG08:complement(4944280..4953981)
Genome browser
AA seq
1046 aa
AA seq
DB search
MGVPAFYRWLSDRYPLSITDVVEEELTADGGGVLLPIDVSKPNPNGMEFDNLYLDMNGIV
HPCFHPDGKPAPATYDDVFQSIFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAADAEAEEERLRKEFEGEGQLLSAKEKPETSDSNVITPGTQFMAKLSVALKSCVQ
TRLNDNPGWKNIKVILSDSNAPGEGEHKIMEYIRLQRNLPGSNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQQDKCFLCAQVGHFAADCPGKPGTEDKDQTADDTPIHKKK
YQFLHIWVLREYLQYELEIPNPPFEIDFERLVDDFVFLCFFVGNDFLPHMPTLEIREGSI
NLLMHIYRKEFTTMGGYLTDAGEVFLDRVEHFIQSVAVHEDQIFQKRVRIQQAAENNEQM
KARSRGEMPVEPRPSIVDKVKFGEPGYKERYYAENFGVSNPEEIDKIKEDIVLKYVEGLC
WVCWYYYQGVRSWKWYYPYHYAPFASDLKDLHDLDIIFSEGEPFKPFDQLMGTLPASSSS
ELPTKYRDLMTDPSSPIFHFYPAEFEIDMNGKRFAWQGIAKLPFIDENKLLAATRKLENT
LTEEEQRRNNVMPNSLFVNRAHGLAPQILLYYKVCSQSPPHERDACPIDSNASSGGMNGY
LLLCDLLPSAINGWQDIESNQVLNIIYRNPHKHKHNPKPPVGVVMPKKLLKPIDIKPSPV
LWHEDNSGRRQQGRERPQVPGAIVGCQLGEAAHRLIKNTLNIKLNNTSHELLEQPPGHHI
GNRLQSAGPSGHRNYHGGQNYRQHFRKQDRSQHQEHIHNVKTGFSDLTMEDGVRATPSRL
QKSRPTTNPQHQFEQNTRKYYGENSNAYYGQHNQQGAVFRPRYPISTNGGQNYRQNFRIQ
DRSQEQIHNVKTEFSALTMEEGVRTRPSKPPNSRPTINPQHQFVQNIGPPVSPKVITKAP
PKVITKAPIPPKVITKASVSPKVITKAPVPPKVITKAPVPPKVITKAPPMNETYTRHQEA
ALRAPAYNKQVKVYRIKTSQPQDGNQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccagcgttttaccggtggctctcggaccggtacccgctctcgatcaccgac
gttgtggaggaagagctcaccgccgacggcggtggcgttctgctgccgattgatgtgtct
aaacctaatcccaacggcatggagtttgacaacttgtacttggatatgaacggtatcgtt
cacccttgttttcaccctgatggcaagcctgctcctgctacctatgatgatgtattccaa
tcaatatttgattacattgaccacctcttttcgttagttcgtccaagaaagcttctctat
cttgctattgatggtgttgcaccaagggccaaaatgaatcagcagcgttctcggcgcttc
cgagcggcaaaagatgcagctgatgctgaagccgaagaggaaaggctgaggaaagaattt
gagggtgagggacaacttttgtctgctaaagagaagcctgaaacttctgactcaaatgtc
attacccctggcactcaatttatggcaaaactgtcagtggcacttaagtcttgtgtacaa
actagattgaacgacaatcctggatggaagaatataaaggttatactttctgattcaaat
gctcctggtgagggagaacataaaataatggaatacatccggttacaacgcaaccttcct
ggttccaatcctaatactcgacactgtttgtatggattggatgctgatttgattatgctc
tccttagccacacatgaggttcacttctcaatattgagggaggtaattactttacccgga
caacaggacaagtgttttctgtgtgcccaagttggccattttgcagctgattgtcccggt
aagccaggcactgaagacaaggaccagactgctgatgataccccaattcacaagaagaaa
taccagtttcttcacatctgggtgctgcgtgaatatttgcaatacgaattggagattccc
aatcctccttttgagattgactttgaacgattagtggatgattttgtgtttctatgcttc
tttgttggcaatgactttcttccacatatgccaacactagagatcagggaggggtctata
aatttattgatgcacatatatagaaaggaatttactaccatgggtggttatcttactgat
gcgggtgaggttttcctagatagagtggaacattttattcagtccgttgctgttcatgaa
gatcaaatctttcagaaacgtgttcgaattcagcaggctgcggaaaataacgaacagatg
aaagctaggtcaagaggagaaatgcctgtagagccacgtccctcaattgtggataaggtt
aagttcggggagcctggatacaaggaaaggtattatgctgaaaatttcggtgtatcaaat
ccagaggagattgacaaaattaaggaagatatagtcttgaagtatgtggaaggcctttgt
tgggtttgctggtattactatcagggtgtccgctcgtggaaatggtactacccataccat
tatgctccttttgcttctgatcttaaagatctacatgatctggatattatattctctgag
ggagagccattcaaaccatttgatcagctcatgggcacccttcctgcttcaagttcgagt
gaattgccaacaaaatatagggatttgatgactgacccttcctcacctatttttcacttc
taccctgctgaatttgagatcgatatgaatggcaaacgatttgcatggcagggtattgcc
aagttgccattcatcgatgagaataaattgcttgccgccacaaggaagcttgaaaacaca
ttaacggaggaagaacaacgtcggaataatgtgatgcccaattctctttttgtcaaccgt
gcacatggtttggctccacaaatcttattgtattacaaagtttgtagtcaatcaccccca
catgaaagagatgcttgccctattgactcaaatgctagcagtggagggatgaatggatat
cttttgttatgtgatcttttaccttccgcaatcaatggatggcaagatattgagagtaac
caagtgttaaatattatatatcgtaatcctcataaacataaacataacccaaaacctcct
gtcggtgtagtaatgcccaaaaagttattaaaacccattgatattaaacctagtcctgtg
ctatggcatgaagacaattctggtcggagacagcaaggcagagaaaggccacaagtacct
ggagcaatagttggctgtcaactgggagaagcagctcatcgtcttatcaagaacaccctt
aacattaaactgaataatacatctcatgaattgttggagcaacctccaggccatcatata
gggaacaggcttcaatcagcaggaccctctggacacagaaattatcatggaggacagaat
tacagacaacattttaggaaacaagataggtcacagcatcaagaacatatccacaatgtg
aagactgggttttctgatttaacaatggaggatggagtgagagctaccccatcgaggctg
caaaagtccaggccaacaaccaacccacaacaccaatttgagcaaaacacaagaaagtat
tatggcgagaactcaaatgcttattatggacaacataatcagcagggtgcagtgttcaga
cccagatatccgatctctactaatggtggacagaattatagacaaaattttaggatacaa
gatcggtcacaagaacagatccacaatgtgaagactgagttttctgctttaacaatggag
gaaggagtgagaactaggccatcgaagccaccaaattccagaccaacaatcaatccacaa
catcaatttgtgcagaacattggtcctccagtatcaccaaaggtgattactaaagctcca
ccaaaggtgattaccaaagcaccaataccaccaaaggtgattactaaagcatcagtatca
ccaaaggtgattaccaaagcaccagtaccaccaaaggtgattactaaagcaccagtacca
ccaaaggtgattactaaagcaccacctatgaatgaaacatatactaggcatcaagaagct
gcattgagggcaccagcttataataagcaggtgaaggtttaccgaattaaaacaagccag
ccccaagatgggaatcaataa
DBGET
integrated database retrieval system
