Lupinus angustifolius (narrow-leaved blue lupine): 109361983
Help
Entry
109361983 CDS
T04664
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109361983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lang03041
]
109361983
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109361983
Complex C
U5 SnRNP specific factors
109361983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
Roc
Ras
Septin
Motif
Other DBs
NCBI-GeneID:
109361983
NCBI-ProteinID:
XP_019463083
UniProt:
A0A4P1R2C7
LinkDB
All DBs
Position
LG12:17627494..17632694
Genome browser
AA seq
993 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIDSDFDSDREEDNDDGDDDDTRDRLTNQNDGAASDGEGPTNGWI
TTSNDIDMADNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQSLEQPIIKPVRNIKFEV
GVRDSSTYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTVFMDMLVEQTHHMCTFDSQSEK
HMRYTDTRVDEQERRISIKAVPMSLVMEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLAD
GAVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKIRHTLE
VINNHISAASSIAGDVQVIDPVAGNVCFASGTAGWSFTLQSFAKLYGKIHGIPLEANKFA
SRLWGDFYYHPDTRAFKKKPPASGVERSFVEFVLEPLYKIYSQVIGEHKKSLEITLAELG
VTLSNAAYRLNVRPLLRLACSSIFGAASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDST
IYKAMTQCDSSGPLMVNVTKLYPKSDCSVFDVFGRVYSGKIQTGQTVRVLGEGYSPDDEE
DMTVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPL
QFNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSI
MKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDI
ENGVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLN
AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKIAPEPLHRGSGQIIPTARRVAYSSF
LMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIES
FGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRR
KGMSEDVSIGKFFDEAMMVELAQQAADLHQQMI
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagcttgtacgacgagttcggaaactacatcggaccagaaattgactccgat
tttgactccgacagagaagaagacaatgacgacggcgacgacgatgataccagagatagg
ctcaccaaccagaacgacggcgccgcctccgacggtgagggtcccaccaatggctggatc
acaacctcaaacgacatcgacatggcggacaaccaggtcgtactggcagaagacaagaag
tactatcccaccgcggaagaggtttacggcgatgacgtggaaaccctagttatggacgaa
gatgaacaatccctagagcaaccaattattaaacccgttaggaacattaaatttgaagtt
ggagtgagagattcatctacctatgtatcttctcagtttctacttggcctcatgtcaaac
cctacattggtgaggaacgttgcgcttgttgggaacttgcagcatgggaagacggtgttc
atggatatgttggttgagcagacgcatcatatgtgtacgtttgattcgcagagtgagaag
catatgaggtatactgatacaagggttgatgaacaggagaggaggatttcgattaaggcg
gttccgatgtcgcttgtgatggaagatagtaattctaagtcttatttgtgtaatattatg
gatacaccaggtcatgtcaatttctctgatgaaatgaccgcggcgttgaggcttgctgat
ggtgctgtgttgattgtggatgctgctgaaggagtcatggttaacacagagagggcaata
cgccatgccatccaggagcggctgcctattgttgttgtcatcaacaaggttgacagactc
ataactgaacttaagttacctcctaaagatgcttaccataaaataaggcatacattggaa
gttatcaataaccatatatctgctgcctcttcaattgctggtgacgtccaagttatagac
ccagttgctggaaatgtttgttttgcaagtggtactgcgggatggtcctttacattacaa
tcatttgctaaactatatgggaagatacatggcattcctttggaagctaataaatttgct
tctcgtttgtggggagacttctattatcatccagatactagagccttcaaaaagaaaccc
cctgccagtggagttgagcgatcttttgttgagtttgtgttggaaccactctacaagata
tatagccaagttattggggaacataagaagagtttagagataactcttgcagaacttgga
gtcactctaagtaatgcagcctatagattaaacgttagacctttgctaaggctggcttgt
agctcaatatttggtgcagcttcaggtttcactgatatgcttgttcagcatataccttca
ccaagagatgctgcaattaagaaagttgatcatatatacaccggccctaaagattcaacc
atttacaaagccatgacacagtgtgattcatctgggcccttaatggttaatgtgaccaaa
ctgtatccaaaatcagattgcagcgtgtttgatgtttttggtagagtgtatagtggcaag
atacagacaggacagactgtacgtgttctaggagaaggatactcgccagatgacgaggag
gacatgactgtaaaagaagtgacaaagttgtgggtgtatcaagctagagataggatgcca
atagctgaggctcctcctggttcttgggttctaattgaaggtgttgatgcttcgatcatg
aaaactgccactctttgtaatgtggattatgatgaggatgtatatatattccgacctctt
cagttcaatactctgtcagtggtcaaaacagctaccgagccattaaatccaagcgagttg
ccaaaaatggtggagggcctaaggaaaatcagcaaaagttatcctcttgcagttactaaa
gttgaggagtctggggaacacactatattagggactggtgaactgtacttggattcaatt
atgaaggaccttagagagctgtattctgaggtcgaagtcaaggtggctgatcctgttgtt
tcgttttgtgaaactgttgttgagtcttcatcaatgaaatgttttgctgagacaccaaac
aagaagaataaaataactatgattgctgagccactagaaagaggtctcgctgaggacata
gagaatggtgttgttagcactgattggaatagaaagaaacttggagaatttttccagact
aagtatgactgggatctccttgctgcacggtcaatctgggcatttggccctgataagcag
ggccccaatattctgttagatgacacccttcccactgaagttgacaagaacctgctgaat
gctgtaaaagattccattgttcagggatttcagtggggtgcacgagagggacctctctgt
gatgagcccatcagaaacgttaagttcaagattgttgatgcaaagatagcccctgaacca
cttcatcggggatctggccagatcattccaacagcacgacgagtggcctattcttctttc
cttatggctacccctcgtcttatggaacctgtatattatgtggagattcaaacacccata
gactgtgtatctgcaatatacactgtgctatctcgtaggcgtggacatgttactgctgat
gttcctcaacccggcactcctgcttatattgttaaggcatttttgcccgtgatagaatct
tttggttttgagacagacttgagataccatacccagggtcaagcattttgcctatcagtt
tttgatcattgggctattgttcctggagatcctctggacaagagtattgttttgcgccca
cttgaaccagcaccaatccagcatcttgctcgtgagtttatggtaaaaacaaggcgtaga
aagggaatgagtgaagatgtaagcataggtaaattctttgatgaggctatgatggtggaa
ctggcacagcaggcagcagatcttcatcaacaaatgatatga
DBGET
integrated database retrieval system
