Labrenzia sp. CP4: ACP90_09265
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Entry
ACP90_09265 CDS
T04295
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00300
Lysine biosynthesis
lap00550
Peptidoglycan biosynthesis
lap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACP90_09265
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACP90_09265
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lap01011
]
ACP90_09265
Enzymes [BR:
lap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ACP90_09265
Peptidoglycan biosynthesis and degradation proteins [BR:
lap01011
]
Precursor biosynthesis
Amino acid ligase
ACP90_09265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
ETF
AA_permease_N
Motif
Other DBs
NCBI-ProteinID:
AMN52583
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All DBs
Position
1995993..1997462
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AA seq
489 aa
AA seq
DB search
MDLEYLAAGLTLPEAAEARKITGLTADSRKVQPGFLFAAFKGASVDGTKFAPDAAAAGAI
AILCAEEAADAVRAQVPNTVAVVSAAEPRQVFARMAARFYGAQPDTIVAVTGTAGKTSVA
HFARQIFQSAGHPAASLGTLGVIKPDGESYGGLTTPDPVALHKQLAELEEEGVNHAALEA
SSHGLDQYRLDGVRLTAAAFTNLGRDHMDYHPTIEHYLNAKLRLFKELLPSGGTVVCDPG
EKYADRVMAVAQERGLPLFTVGETGRNLTLTGLKPMGAGQELTIQSARGEYKVTLPLIGR
FQVSNALIAAGLAIAAGIDTGTALRALENLKGAPGRLELAGKTPAGGLVFVDYAHKPDAL
DNALAALKPFARGKLSVIIGAGGDRDPGKRELMGEVAARRADLVIVTDDNPRSEDPATIR
KAVLGGAPDAMEIGDRYEAIAEGVRRLKDGDILCVAGKGHETGQIVGDTVIPFSDHEAVK
RAISLEGNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgagtatttagctgccgggctgaccttgcccgaagcggcagaagctcggaaa
attacggggctgacggctgatagccgcaaagttcagccgggcttcttgtttgccgccttc
aagggggcttccgtcgacgggacaaaattcgccccggacgcagcagcggccggggcaatt
gccattctgtgtgctgaagaggccgcagatgcagtgcgtgcacaggtgccgaacacggtt
gccgttgtcagtgccgcagagcctcgtcaggtttttgcgagaatggcggcccgtttctac
ggagctcaacccgacacaatagttgccgtcaccggaactgcaggcaagacatccgttgct
catttcgcccgtcagattttccagtctgcaggccatcctgccgcaagtcttggtacactg
ggcgttatcaagccggatggagaaagctacggcggcctgacaacgccggacccggttgcc
ttgcacaagcagttggcagagctggaagaagaaggtgtcaatcacgcggcgcttgaggcc
tcttcgcacggtctcgatcagtaccggctggacggtgttcggctgacggcggccgccttc
accaatcttggccgcgatcacatggactatcatccgacgatcgagcattacctgaatgca
aagcttcgcctgttcaaagagttgcttccgtcaggcggcacagtggtctgcgatccgggt
gagaaatatgctgaccgggtcatggcggtcgcgcaggagcgaggactgccgctcttcacg
gtcggagaaaccggccggaacctcacccttaccggcctgaaaccgatgggggcagggcag
gaactgacgatccagagtgcgcgcggcgaatacaaggtgacgctgcccctgatcggtcgc
ttccaggtttccaacgcactcattgctgccggtctcgcgattgccgctggcatcgacacg
ggaactgccttgcgggcccttgaaaacctgaagggggctccgggccgtcttgaacttgcc
ggcaagacgccagcaggcgggctggtttttgtcgattacgcccacaagccggacgcgctt
gataacgcccttgcggccttgaagccatttgcccgtggcaagctgtccgtgattatcggc
gccggtggcgacagggaccccggaaaacgcgagctgatgggggaagtcgcggctcgcagg
gccgatctggttatcgtcaccgacgacaacccgcgctcggaagacccggcgaccattcgc
aaggcggtgttgggtggcgcacccgatgcaatggagattggcgaccggtatgaagcgatc
gcagagggagttcgccgcctaaaggatggcgatatcctgtgtgtggccggaaaaggtcac
gaaacgggccagattgttggcgacacagtgattcccttttccgatcacgaagccgtaaag
cgcgccatcagtcttgaaggaaacacatga
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