Labrenzia sp. CP4: ACP90_09345 Help Entry ACP90_09345       CDS       T04295                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lap  Labrenzia sp. CP4 Pathway lap03030   DNA replication lap03410   Base excision repair lap03420   Nucleotide excision repair lap03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lap00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ACP90_09345    03410 Base excision repair     ACP90_09345    03420 Nucleotide excision repair     ACP90_09345    03430 Mismatch repair     ACP90_09345  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lap03032]     ACP90_09345    03400 DNA repair and recombination proteins [BR:lap03400]     ACP90_09345 Enzymes [BR:lap01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ACP90_09345 DNA replication proteins [BR:lap03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ACP90_09345 DNA repair and recombination proteins [BR:lap03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ACP90_09345    NER (nucleotide excision repair)     GGR (global genome repair) factors      ACP90_09345    MMR (mismatch excision repair)     DNA ligase      ACP90_09345   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ACP90_09345 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD PTCB-BRCT Nlig-Ia DUF4796_N Motif Other DBs NCBI-ProteinID:  AMN52596 LinkDB All DBs Position 2015634..2017787 Genome browser AA seq 717 aa AA seqDB search MTDTSFAQTDIDALTQEEAQVELKRLAAEIAEHDRRYHQEDAPVISDADYDALRRRNAAI EARFPNLILEDGPSAQVGAAPASGFGKITHRVPMLSLDNAFNDDDVRDFVGRVRRFLKFD PLMGALAVTAEPKIDGLSLSLRYENGTLVYAATRGDGTTGENVTENAKTIKDIPVKLSGT VPGVVEVRGEVYMAHKDFQALNERMAANGGKVFANPRNAAAGSLRQLKSEITASRPLRFF AYAWGEMSELPEDTQFGMVKQLEAWGFQVNPLMKRCETVEELLGVYHGIEESRAQLDYDI DGVVYKVDRLDLQERLGFVSRSPRWAIAHKFPAEQAYTILNDIEIQVGRTGALTPVAKLE PITVGGVVVSNATLHNEDHIKGIGQDGESIRGGKDLRIGDTVKIQRAGDVIPQIVDIDLD KRPDGAEAFEFPTICPACGSHAVREEKEKTGRRDAVRRCTGGLICPAQATEKLKHFVSRN AFDIEGFGDKQVDAFYKEGLVMAPADIFTLEERDKRSLTKLRNREGWGAVSAKNLFEAIN ARREIDLHRFIFALGIRHVGEGNAKLLARAYGSWAVFYAAMKAAHDTAGEAWTELNDIDG IGHIVAEALAEFFAEQHNLDQLDALLVEVSPKDAEKINASGSPVAGKTVVFTGSLERMTR DEAKAMAERFGAKTAGSVSKKTDLVVAGPGAGSKLKKAQELEIEVISEDDWFDLVGA NT seq 2154 nt NT seq  +upstreamnt  +downstreamnt atgactgacacttccttcgcccaaaccgacatcgacgccctgacgcaggaggaagcacag gtcgagctgaaacggctggcggcggaaatcgccgagcacgaccgccgctatcaccaggaa gatgccccggtgatctcggatgcggactatgacgccctgcgccggcggaacgcggccatc gaggcccggtttcccaacctcattcttgaagacggtccctctgcccaggtaggggcggcc ccggcgtccggtttcggcaagattactcaccgggtgccgatgctgtcgctggacaatgcc ttcaacgatgacgacgtccgggatttcgtcggccgcgtgcgccggtttctgaaattcgat ccgctgatgggggctctggcagttaccgcggagccgaagatcgacggtctgtcgctgtct cttcggtatgaaaacggcactctggtttacgccgcaacgcgaggtgacggcaccacaggt gaaaacgtcaccgagaacgcgaagacaatcaaggatattccggtaaagctgtccggcacg gtgccgggcgtcgttgaagtgcgcggcgaagtctatatggcgcacaaggattttcaggcg ctgaacgagcgcatggcagccaatggcggcaaggttttcgccaacccgcgcaacgcggcg gcgggctcgttgcgccagctgaaatccgaaatcacggcctcccgcccactgcggttcttc gcttatgcctggggcgagatgagcgagctgccggaagacacccagttcggcatggtcaag cagctggaagcctggggctttcaggtcaatccgctgatgaaacgctgtgaaaccgtggaa gagcttctcggagtctatcacggcatcgaggaaagccgtgcccagctcgattatgatatc gatggtgtggtctacaaggtcgaccggctggacctgcaggagcgcctcggctttgtctcg cggtctccccggtgggcgattgctcacaagttcccggccgaacaggcctacaccattctc aacgacatcgagatccaggttggccgaacaggtgccctgacgccggttgccaagctggag ccgatcacggtgggcggtgtcgtcgtttcaaacgcgacccttcacaacgaagaccatatc aagggaattggccaggacggagagtcgatccgcggcggcaaggatcttcgcatcggtgac acggtgaagatccagcgtgccggcgacgtcattccgcagattgtcgatatcgatctggac aaacgacccgatggggcggaagccttcgagtttccaacgatctgccccgcctgtggcagc cacgcggtgcgcgaggaaaaggaaaagaccggccgccgcgatgccgtgcgccgctgcacc ggcggtctgatttgcccggcccaggcaacggaaaagctcaagcatttcgtctcgcgcaat gccttcgacatcgaaggcttcggcgacaagcaggtcgacgccttctacaaggaaggcctt gtgatggccccggcggacatcttcacgctggaggagcgggacaagcgctctctcaccaag ttgcgcaaccgggaaggctggggggccgtttcggcgaagaaccttttcgaggcaatcaac gcgcggcgagagattgaccttcatcgtttcatcttcgcccttggcatccgtcacgtgggc gagggcaacgccaagcttctggcacgtgcctatggctcctgggcggtgttctatgcagcc atgaaggcggcgcatgacacggcgggcgaagcctggacagagctcaatgacatcgacggc atcggccatatcgttgccgaggcgctggcggagttctttgccgagcaacacaatctcgac caactcgacgcacttctggtcgaggtatcacccaaggacgctgaaaagatcaacgcctcc ggctcgccggtcgccggcaagacagtggttttcaccggctcgctggaacgaatgacccgc gacgaagccaaggccatggccgaacgctttggtgccaagacggcaggttccgtgtcgaaa aagaccgacctggtggtggccggtcctggtgctggttcaaagctgaaaaaggcacaggag ctggagatcgaagtcatctccgaggatgactggttcgatctggtgggggcctga

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