Lactobacillus apis: DKL56_03975
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Entry
DKL56_03975 CDS
T06844
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DKL56_03975 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_03975 (nth)
Enzymes [BR:
lapi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DKL56_03975 (nth)
DNA repair and recombination proteins [BR:
lapi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DKL56_03975 (nth)
Prokaryotic type
DKL56_03975 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RIN1
YkyB
RecR_HhH
LAM_C
DUF1512
Erf4
Motif
Other DBs
NCBI-ProteinID:
AWM73710
LinkDB
All DBs
Position
complement(817121..817750)
Genome browser
AA seq
209 aa
AA seq
DB search
MPKEKLLSTEEARKVLRTINQMYPDAKSELVWDNKFHLLCAVLMSAQTTDKMVNRVMPKF
IEDYPDPDALAKASIKDIENHISKIGLFHSKAKHLKETAEILVDKYHSQIPEDKKDLVSL
PGVGEKTANVVLADGFGVPAIAVDTHVSRISKRFHIVPQNSKPLEIEKRLEEILPKDEWI
HTHHAMILFGRYSMTARDKNDPYTYLKTK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagaaaaattattgagtacagaggaagctcgtaaagtattgcgaactattaat
caaatgtaccccgatgctaaaagtgagttggtttgggacaataaatttcatttattgtgt
gctgttttaatgagtgcacagacaaccgacaaaatggtaaatcgagtaatgccaaaattc
attgaagattacccagatccagatgcattagcaaaggcttcaattaaggacattgaaaac
catatatcaaaaattggtctttttcattctaaggctaagcatttaaaagaaactgctgaa
attttggttgataaatatcatagccagattcctgaagacaaaaaagatttggtttctttg
cctggagtaggagagaaaaccgctaatgttgttctagcagatggctttggcgtccctgct
attgcagtagatacgcacgtatctcgcatctcaaaaagattccacatcgttccacaaaat
tccaaacctttggaaattgaaaagaggttagaagagattttgcccaaagatgagtggatt
catactcatcacgcaatgattctgtttggtcgttattcgatgactgcacgtgacaaaaat
gatccatatacatatttgaagacaaagtag
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