Leisingera aquaemixtae: R2C4_08765
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Entry
R2C4_08765 CDS
T06085
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
laqu
Leisingera aquaemixtae
Pathway
laqu01501
beta-Lactam resistance
laqu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
laqu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R2C4_08765
01503 Cationic antimicrobial peptide (CAMP) resistance
R2C4_08765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
laqu02000
]
R2C4_08765
01504 Antimicrobial resistance genes [BR:
laqu01504
]
R2C4_08765
Transporters [BR:
laqu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R2C4_08765
Antimicrobial resistance genes [BR:
laqu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R2C4_08765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDI75829
LinkDB
All DBs
Position
1456381..1459506
Genome browser
AA seq
1041 aa
AA seq
DB search
MFSSLFISRPKFAIVISLVLTVMGVIGYFVLPVAQFPEITPPVVNVTASYPGANAETVEK
SVAAPIEAQVNGVDGMLYMSSNSADNGSYSLSVTFEVGTDPDIASVNVQNRVAQAVAALP
AEVTANGVVTQKSSSNMLLVTALTSPDRTYDSVFLSNYAAINIKDALARVAGVGKADILT
NFEYAMRVWLDPNKMAGLGISPGDVINAVREQNIEVSAGQVGAPPVPGDQVFQYTIKSKG
RLTEVSEFEDIVIRTGDGGSTVRLSDIARVELGASNYSASGFYDGVPATILAVYQAPGAN
ALAVSEAVLAEMERLSQDFPADVAYSVPFNTTDFVEQSLNDVISTLMMTFVLVISVVFIF
LGSLRATVIPAVAIPVSLIGTFAFLLALGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLPPAEATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGKLYSQFAVTISVAV
VISSINALTLSPALCAIVLKARSGPPKGLLAVFENMIGGVRSGYLSVVTRLLRLPVIGLA
IIAAFAFGTGTVFTATSKGFLPSEDNGYLFVDVQLPDAAALGRTETVTSRIDEQIRQIPG
VQGTVLVNGFSLLNGAGANGAMIIANLAPWNERQSEPLQPNAILGQIYGIANAEAAASIV
AFNPPPISGLGMSAGVEMAVQQTAGGTPQDLAQSVGSLVYSANQRPEIAQSYTTFRANVP
QVFVDLDREKAKTLNVPIAEVFQTMQTYLGSYYVNDFNLFGRVYKVMLQAEGSYRDKIED
IGGLYVRAQSGEMVPLSTLIDVENVLGPVLLKRHNIFRSATVTAVPAPGLSTGDAIRVMQ
EEAATALPPGYAFEWTGTAQQQLDSAGLVTVILAMAVLFGYLFLVAQYESWSMPVAILLS
VIVALFGAVAAVAIAGNDINLYTQIGMIMLIGLASKNAILIVEFAMERRAAGLSIRDAAQ
EAAKQRFRAVMMTALSFLLGVVPLMAASGAGAASQRAIGIAVFGGMLAATVVGVIVVPVL
YAMMQGVRERIKGTPAASPAE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctctctctttatctcacgccccaaattcgcaattgtcatttcccttgtgctg
acggtcatgggggtgatcggttatttcgttcttcctgtcgcccagttcccggaaatcacc
ccgccagtggtgaacgtcaccgccagctacccgggcgccaacgcggaaaccgttgaaaaa
agcgtcgccgcgccgattgaggcgcaggtgaacggggtggacgggatgctttatatgtcc
tccaactccgccgacaacggcagctattcgctgtcggtgaccttcgaggtcggcacggat
ccggacattgcctctgtcaacgtgcagaaccgggtggcgcaggcggtggcagcgctgcct
gccgaggtcaccgccaatggcgtggtgacgcagaaaagctcctccaacatgctgctggtg
accgcgctcacctcacccgaccggacgtatgacagcgtgtttctgtcgaactatgccgcc
atcaacatcaaagatgcgctggcgcgggtggccggcgtcggcaaggcggacatcctgaca
aactttgaatacgccatgcgcgtctggctggaccccaacaagatggccggccttggcatt
tcacccggcgacgtgatcaacgcggtgcgggagcagaatatcgaggtctcggcggggcag
gtgggtgcaccgccggtgcccggcgaccaggtgttccagtacaccatcaaatccaagggc
cgcctgaccgaagtcagcgagtttgaggacatcgtgatccgcaccggcgatggcggcagc
accgtgcggctgagcgacatcgcgcgggtggagctgggtgcctccaactacagcgcttcg
ggcttttacgacggcgtgccggccaccattctggccgtctaccaggctcctggcgccaat
gcgctggccgtttccgaagcggtgctggcagagatggagaggctgtcgcaggacttcccc
gcagacgtcgcctattccgtgcccttcaacaccaccgattttgtcgagcaatcgctgaac
gatgtgatctccaccctgatgatgacctttgtgctggtgatctcggtggtgttcatcttc
ctgggctcgctgcgggcaaccgttatcccagcggtggctatcccggtgtcgctgatcggg
acttttgcgtttctgctggcgcttggcatgtcgctcaacactatctcgctgtttgcgctg
gtgctggcgatcggcatcgtggtggatgacgccatcgtggtggtggagaacgtcgaacgg
atcatcgccgaggaggggctgcccccggcggaagccacccgcaaggcgatgggacagatc
accggaccggtcatcgcgaccacgctggtgctgctggcggtgtttgtgccagtcaccttc
atgcccgggattaccggcaagctgtactcccagtttgccgtcaccatttcggttgcggtg
gtgatctcctccatcaacgcattgacgctgtcgccggcgctttgcgccatcgtgctgaaa
gcccgctctggcccgcccaaagggctgctggcggtgtttgaaaacatgatcggcggagtg
cgcagcggctacctgagcgttgtcacgcgcctgctgcgcctgccggtgatcgggctggcg
attatcgcggcttttgccttcggcaccggaacggtgtttaccgcgacatccaagggcttc
ctgccgtccgaggacaacgggtatctgtttgttgatgtgcagctccccgatgcggctgct
ttggggcggacggagaccgtgaccagccggattgacgaacagatccgccagatccccggc
gtccagggcactgtcctggtcaatggcttcagcctgctgaacggggccggcgccaacggc
gcgatgatcatcgccaacctggcgccgtggaacgagcggcaaagcgaaccgctgcagcca
aacgccatcctcggccagatctacggcatcgccaacgccgaggcggcagccagtatcgta
gccttcaacccgccgccgatctccggcctgggcatgtcggccggtgtggagatggcggtc
cagcagaccgcaggcggcacgccgcaggatcttgcgcaatccgtcgggtcgctggtctat
tccgccaatcagcggcctgagatcgcccagtcctacaccaccttccgggccaacgtgccg
caggtttttgtcgatctggaccgcgagaaagccaagacgctgaacgtgccgattgccgag
gtcttccagaccatgcagacgtacctggggtcttactatgtaaacgatttcaacctgttc
gggcgcgtctacaaggtaatgctgcaggccgagggctcctatcgcgacaagatcgaggat
attggcggcctgtatgtgcgggcgcagtccggcgagatggtgccgctgtcgaccctgata
gatgtggagaacgtcttggggccggtgctgctcaagcggcacaacatcttccgctcggcc
accgtgacggcagtgcccgcgcccgggctgtcaaccggcgatgccatccgggtgatgcag
gaggaggccgcgacggcgctgccgccgggctatgcctttgaatggaccggcaccgcgcag
cagcagctcgactccgccgggctggtgacggtgatcctggcgatggcggtgctgttcggc
tacctgttcctggtggcgcagtacgaaagctggagcatgccggtggcgatcctgctgtcc
gtgatcgtcgccttgttcggggccgtggccgcagtggccatcgcgggcaacgacatcaac
ctctacacccagatcgggatgatcatgctgatcggcctggcgtcgaaaaatgccattctc
attgtcgaattcgcaatggagcggcgcgccgcggggctgagcatccgcgacgccgcgcaa
gaggcggccaagcagcggttccgcgccgtgatgatgacggcgctgtccttcctgctgggg
gtggtgccgctgatggcggcctccggcgcaggtgctgccagccagcgcgcaatcggcatc
gcggtctttggcggcatgctggcagcgacggtggtcggggtgatcgtggtgccggtgctt
tatgcgatgatgcagggcgtacgcgaacgcatcaagggcaccccggcagccagcccggcg
gaataa
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