Loxodonta africana (African savanna elephant): 100655262
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Entry
100655262 CDS
T04351
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav05017
Spinocerebellar ataxia
lav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100655262 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100655262 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
100655262 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100655262 (TRPC3)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100655262 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
100655262
NCBI-ProteinID:
XP_010588832
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MSVEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAEYGNIPVVRKM
LEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYVRIV
EAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAAHCQKYEVVHM
LLMKGARIERPHDYFCKCGECTEKQRHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTA
LELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLE
VHRHKSSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVAL
GLPFLAIGYWVAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNIT
VIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLS
IFIAAFTARFLAFLQATKAQQYVDSYIQESDLSEVTLPPEIQYFTYARDKWLPSDPQIIS
EGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFIL
YSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTM
VVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFVY
FIMRIISFSKCRRRRLQKDIEMGMSNSKSRLNLFTQSNSRVFESHSFNSILNQPTRYQQI
MKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSE
KLNPSMLRCE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggagggaagcccatctctgaggcgcatgacggtgatgcgagagaagggccgg
cgccaggccgtccggggcccagccttcatgttcaatgatcggggcaccagcctcaccgcc
gaggaggagcgcttcctcgacgccgccgagtatggcaacatccctgtggtgcgcaagatg
ctggaggagtccaagacgctgaacgtcaactgcgtggactacatgggccagaacgcgctg
cagctggccgtgggcaacgagcacctggaggtgacggagctgctgctcaagaaggagaac
ctggcgcgcatcggcgacgccctgctgcttgccatcagcaagggctacgtgcgcatcgtg
gaggccatcctcaaccaccctggcttcgcggccagcaagcgcctgaccctgagcccctgc
gagcaggagctgcaggacgacgacttctatgcttacgacgaggacggcacgcgcttctcg
cccgacatcacccccatcatcctggcggcgcactgccagaagtacgaggtggtgcacatg
ctgctgatgaagggcgcccggatcgagcggccgcacgattacttctgcaagtgcggggag
tgcacggagaagcagaggcacgactccttcagccactcccgctctaggatcaacgcctac
aaggggctagccagcccggcttacctgtccctgtccagcgaggaccccgtgcttacggct
ctggagctcagcaatgagttggccaagctggccaatatagagaaggagttcaagaatgac
tatcgaaagctctccatgcaatgcaaagactttgttgtgggcgtgctggatctttgccga
gactctgaagaggtggaagccattctgaatggagatctggaatcagcagagcctctggag
gtgcacaggcataagtcttcattgagtcgtgtcaaactcgccattaagtatgaagtcaaa
aagtttgtggctcaccccaactgccagcagcagctgttgacgatctggtatgagaacctc
tcgggcctgcgggaacagaccatagctatcaagtgtctggtggtgctggttgtggccttg
ggcctgccgttccttgccattggctactgggttgcaccttgcagcaggctggggaaaatt
ctgcgaagcccttttatgaagtttgtggcgcatgctgcttccttcatcatcttcctgggc
ctgctcgtgttcaatgcctcagacaggttcgaaggcatcaccacgctgccaaatatcact
gtcattgactatcccaaacagatcttcagggtgaaaaccacccagttcacatggactgaa
atgctaattatggtttgggttcttggaatgatgtggtcggaatgtaaggagctctggctg
gaaggacctagggaatacattttgcagttgtggaatgtgctcgactttgggatgctctcc
atcttcattgctgctttcacggccagattcttagctttccttcaggcaactaaagcacaa
caatatgtggacagttacatccaagagagtgacctcagtgaagtcacacttccaccagag
atacagtatttcacttatgccagagataaatggctcccttcggatcctcagatcatatct
gaaggcctctatgccatagctgtcgtgctcagcttctctcggatcgcgtacatcctccct
gcaaatgagagctttggccccttacagatctctcttggaaggactgtaaaagacatattc
aagttcatggtcctctttattatggtctttcttgcctttatgattggcatgtttatactt
tattcttactaccttggggctaaagtaaatgctgcatttaccactgtagaagaaagtttc
aagactttgttttggtcaatatttgggttgtctgaagtgacttccgttgtgctcaagtat
gatcacaaattcatagagaatattggatatgttctttatggaatatacaatgtaacaatg
gtggtggttttactcaacatgctaattgctatgatcaatagctcatatcaagaaattgag
gatgacagtgacgtagaatggaagttcgctcgttcaaaactttggttatcctactttgat
gatggaaaaacattacctccacctttcagtctagttcctagtccaaaatcctttgtttat
ttcatcatgcggatcattagcttctccaaatgcaggcggagaaggctacagaaggacata
gaaatgggaatgagtaactccaagtccaggttaaacctcttcactcagtctaactcaaga
gtttttgaatcacacagttttaacagcattctcaatcagccgacacgttatcagcagata
atgaaaagactcataaagcgatatgttctaaaagcacaagtagacaaggaaaatgatgaa
gttaatgaaggtgaattaaaagaaatcaagcaagatatttccagtcttcgttatgaactt
ttggaggacaagagccaagcaactgaggagttagccattctaattcataaactcagcgag
aaactgaaccccagcatgctaagatgtgaatga
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integrated database retrieval system
