Loxodonta africana (African savanna elephant): 100658414
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Entry
100658414 CDS
T04351
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04022
cGMP-PKG signaling pathway
lav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
100658414 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100658414 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100658414 (TRPC6)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100658414 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
100658414
NCBI-ProteinID:
XP_003415645
UniProt:
G3TEG0
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSQSLAFGPRRGTSLPAAAGAGARRNESQDYLLMDSELGDDGCAQFPYGYYPCFRGTDNR
LAHRRQTILREKGRRLANRGPAYMFSDRSTSLSIEEERFLDAAEYGNVPVVRKMLEECLS
LNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILGH
PAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGA
RIERPHDYFCKCGECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALVLSNE
LAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMRHNGGDHGRPN
LSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLAL
IYWFAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAKQ
LFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASFI
ARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAIA
VVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGA
KQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNM
LIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLFYLLLKLKK
WISELFQGHKKGFQEDAEMNKRNEEKKFGILGSHEDLSKLSLDKKQLEHSKQSSIRSSED
FHLNSFNNPPRQYQKIMKRLIKRYVLKAQIDKESDEVNEGELKEIKQDISSLRYELLEEK
SQNTEDLAELIRKLGEKLSMEPNQEENNR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagcctggcgttcgggccccggaggggcacctctctcccggccgcggccggg
gccggggcgcggcgcaacgaaagccaggactatctgctcatggactcggagctgggagac
gacggctgtgcgcagtttccctacggctactacccctgcttccggggcactgacaacaga
ctggctcaccggcggcagacaattctccgtgagaaggggagaaggttagcaaatcgaggg
ccagcctacatgtttagtgatcgctcaacaagcctatctattgaggaggaacgcttttta
gatgcagccgaatatggcaacgttccagtggtgcggaagatgttggaagaatgcctttcg
ctcaacgttaactgtgtggattacatgggccagaatgccctgcagttggcagtggccaat
gagcatctggaaattacagaacttcttctcaagaaagaaaatctgtctcgagttggggat
gccttgcttctagccattagtaaaggttatgttcgcattgtggaagcaattcttggtcat
ccagcttttgctgaaggcaagaggctagccaccagccccagtcagtctgaactccagcag
gatgatttttatgcttatgatgaagatgggacacggttctcccatgatgttactccaatc
atcctggctgcccactgccaggaatatgaaattgtgcacaccctcctgcggaagggtgct
cggattgaacggcctcatgattatttctgcaagtgcggtgaatgcaaccagaaacagaag
catgactcctttagccactcaagatctaggattaatgcctataaaggcttggcaagtcct
gcttacctgtcactgtccagtgaagatccagtcatgacagccttagtacttagcaatgag
ctggcagtgttggccaacattgagaaagagttcaagaatgactacaaaaaactgtcaatg
cagtgcaaagattttgttgttggacttcttgatctgtgcagaaatactgaagaagtagag
gccattctgaatggggatgttgagatgcgccataatggtggagatcacggccgtccaaac
ctcagccgtttaaaacttgccattaaatatgaagtaaaaaaatttgttgctcatccaaac
tgccaacagcagcttctgtccatctggtatgagaatctttctggtttacggcagcagacc
atggcagtcaagtttcttgtggtcctcgctgttgccatcggactgcccttcctggctctc
atctactggtttgccccatgcagcaagatggggaagataatgcgtggtccattcatgaag
tttgtagcacacgccgcctccttcaccatttttctgggactgctagtcatgaatgcagct
gacagatttgaaggcaccaaactcctgcctaatgaaaccagcacagataatgcaaaacag
ctgtttagaatgaaaacatcctgcttctcatggatggagatgctcattatatcctgggta
ataggaatgatatgggctgaatgtaaagaaatttggactcaaggccccaaagaatacttg
tttgagttgtggaatatgcttgattttggcatgttagcaatctttgcagcatcattcatt
gcgagattcatggcattttggcatgcttccaaagcccagagcatcattgatgcaaatgat
actttgaaggacttgaccaaagttacattgggagacaatgtgaaatactacaatttggct
aggataaagtgggacccctcggatcctcaaattatatctgaaggtctttatgcaattgct
gtggtcttaagtttctccagaatagcttatattttgccagcaaatgaaagctttggacct
ctacagatatcacttggaagaacagtgaaagacatctttaagttcatggtcatatttatc
atggtgtttgtggcctttatgattggaatgttcaacctgtattcctactaccgtggtgca
aaacaaaatgaagccttcacaacagttgaggagagttttaagacactgttctgggctata
tttggactttctgaagtgaaatcagtggtcatcaactataatcacaaattcattgaaaac
atcggttatgttctttatggagtctataatgttacgatggtcattgttttgttaaatatg
ttaattgctatgatcaacagttcattccaggagattgaggatgacgctgacgtggagtgg
aaatttgcaagggcgaaactttggttttcctactttgaggagggaagaactctacctgtt
cccttcaacctggtgccaagtccaaagtccctgttctatctcttactgaagcttaaaaaa
tggatttctgaactgttccagggccataaaaaaggtttccaggaagatgcagagatgaac
aagagaaatgaagagaagaaatttggaattttaggaagtcacgaagacctttcaaaatta
tcacttgataaaaaacagcttgaacacagtaagcaatctagtataaggagctcggaagat
ttccatttaaatagtttcaataatcctccaagacaatatcagaaaataatgaagaggctg
attaaaagatacgtactgaaagcccagatagataaggagagcgacgaagtgaatgaagga
gaactgaaggaaattaaacaggacatctcaagtctgcggtatgaactccttgaagaaaaa
tctcagaatacagaagacttagcagaacttattagaaaacttggggagaaattatcaatg
gagccaaatcaagaagaaaacaacagataa
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