KEGG   Loxodonta africana (African savanna elephant): 100659676
Entry
100659676         CDS       T04351                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04514  Cell adhesion molecules
lav04612  Antigen processing and presentation
lav04640  Hematopoietic cell lineage
lav04658  Th1 and Th2 cell differentiation
lav04659  Th17 cell differentiation
lav04672  Intestinal immune network for IgA production
lav04940  Type I diabetes mellitus
lav05140  Leishmaniasis
lav05145  Toxoplasmosis
lav05150  Staphylococcus aureus infection
lav05152  Tuberculosis
lav05164  Influenza A
lav05166  Human T-cell leukemia virus 1 infection
lav05168  Herpes simplex virus 1 infection
lav05169  Epstein-Barr virus infection
lav05310  Asthma
lav05320  Autoimmune thyroid disease
lav05321  Inflammatory bowel disease
lav05322  Systemic lupus erythematosus
lav05323  Rheumatoid arthritis
lav05330  Allograft rejection
lav05332  Graft-versus-host disease
lav05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100659676
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100659676
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100659676
   04612 Antigen processing and presentation
    100659676
   04658 Th1 and Th2 cell differentiation
    100659676
   04659 Th17 cell differentiation
    100659676
   04672 Intestinal immune network for IgA production
    100659676
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100659676
   05164 Influenza A
    100659676
   05168 Herpes simplex virus 1 infection
    100659676
   05169 Epstein-Barr virus infection
    100659676
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100659676
   05152 Tuberculosis
    100659676
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100659676
   05140 Leishmaniasis
    100659676
  09163 Immune disease
   05310 Asthma
    100659676
   05322 Systemic lupus erythematosus
    100659676
   05323 Rheumatoid arthritis
    100659676
   05320 Autoimmune thyroid disease
    100659676
   05321 Inflammatory bowel disease
    100659676
   05330 Allograft rejection
    100659676
   05332 Graft-versus-host disease
    100659676
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100659676
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100659676
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lav04147]
    100659676
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100659676
  Exosomal proteins of epithelial cells
   100659676
  Exosomal proteins of breast milk
   100659676
SSDB
Motif
Pfam: MHC_II_beta C1-set ig Ig_3 C2-set_3 C2-set_2
Other DBs
NCBI-GeneID: 100659676
NCBI-ProteinID: XP_023401118
LinkDB
Position
Unknown
AA seq 270 aa
MVCLWFPRGTWMAALTLILMVLSPPLALSRDTRCKCTLWVVAIMGWDEYFTNGTERVRFV
QRYIYNREEYVRFDSDVGEFVVVTELGRPDAEYWNGQKELLDDRRGEVDRFCRHNYGVFE
SFSVQRRVEPMVTVYLAKTQPLQHHNLLVCSVNGFYPGNIEVRWFRNGQEEEAGVVSTGL
IQNGDWTFQILVMLETIPQSGEVYTCQVEHPSLTSPVTVEWRAQSGSAQSKMLSGIGGLV
LGLLFLGAGLFIHFRNQKARSGLQPTGFLS
NT seq 813 nt   +upstreamnt  +downstreamnt
atggtgtgcttatggttccccaggggcacctggatggcagctctgactctgatactgatg
gtgctgagccctcctctggctttgtccagggacacccgatgtaagtgcacactttgggtg
gtagctattatggggtgggatgagtacttcaccaacgggacggagcgggtgcggtttgtg
cagagatacatctacaaccgggaggagtacgtgcgcttcgacagcgacgtgggggagttc
gtggtggtgacggagctggggcggccggacgccgagtactggaacggccagaaggagctc
ctggatgacaggcgaggcgaggtggacaggttctgcagacacaactacggggtttttgag
agcttctcggtgcagcggagagttgagcccatggtgactgtgtatctggcaaagactcag
cccctgcagcaccacaacctcctggtctgctctgtgaatggtttctatccaggcaacatt
gaagtcagatggttccggaatggccaggaagaggaggctggggttgtctccacaggcctg
atccagaatggagactggaccttccagatcctggtgatgcttgaaaccattcctcagagt
ggagaggtttacacctgccaagtggagcacccaagcctgacgagccctgtcacagtggaa
tggagggcacaatcgggatctgcacagagcaagatgctgagtggaatcgggggcttggtt
ctgggtctgctgttccttggggcagggctgttcatccacttcaggaaccagaaggcacgc
tctggacttcaaccaacaggattcctgagctga

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