Loxodonta africana (African savanna elephant): 100661357
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Entry
100661357 CDS
T04351
Symbol
AGRN
Name
(RefSeq) LOW QUALITY PROTEIN: agrin
KO
K06254
agrin
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04512
ECM-receptor interaction
lav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100661357 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100661357 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lav00535
]
100661357 (AGRN)
Proteoglycans [BR:
lav00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100661357 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
Kazal_CFAI
EGF_laminin
SEA
EGF
hEGF
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
100661357
NCBI-ProteinID:
XP_023407944
LinkDB
All DBs
Position
Unknown
AA seq
1864 aa
AA seq
DB search
MLCGFGAVCELSAEGPGPASCVCKKSACPSVVAPVCGSDASTYSNECELQRAQCTQQRRI
RLLSRGPCGSRDPCLNVTCSFGSTCTRSADGQTAVCLCPTSCPGASEGTVCGSDGTDYPS
ECQLLRHACAHQENLFKKFDGPCDPCQGTPDDPSRMCRVNPRTRQPEMLLRSESCPPRQA
PVCGDDGVTYENDCVMGRTGAAHGILLQKVRSGQCHPRDQCLEPCQFHAVCLSRRGRPRC
SCDRVTCDGAYRPVCAQDGHTYDNECWLHQAECQQQSAILVRHRGPCGQPPSPCLGVQCP
FGATCAVKNGEAACECPQACPGIYDPVCGSDGITYGSTCELAATACALGRETHVARRGPC
DRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGRTYASECELHVAACTHQISLHVA
AAGHCQTCGDMVCAFGAVCSMGQCVCPRCERPPPGPVCGSDGVTYHSVCELREASCRQQT
HIEEARAGPCELAECGSGGSGSGEDGECEPELCRQRGGIWDEDSEDGPCVCDFSCQSVLR
NPVCGSDGVTYGTECELKKAKCESQRELYVAAQGACRGPTAAPLPPMAPPHCTQTPYGCC
QDNVTAAQGVGLAGCPSVCQCNPHGAYGGSCDPASGQCSCRPGVGGIKCDRCEPGFWNFR
GIVTDGRSGCTPCSCDPRGAVRDDCEQMSGLCSCKPGVAGPKCGQCPDGRALGPTGCEAD
SVAPVTCAEMRCEFGASCVEEAGSAHCVCPTPTCSEANATKVCGSDGITYGDECQLRTIA
CRQGLDISVQSLGPCQDSITPSTRPTPAATAKPVIHRALPVPPSALPLGPSSTRHGRPTP
QPSVRPWTTASMPRTTGRPALTVPPTAFSMVASLATSAFGESXSADGGSGDEDLSGDLEA
SGAGSGGLELPEGGDAVTPGPPIERASCYNSPLGCCSDGTTASLDAEGSNCPATKAFQGV
LELEEVEGQELFYTPEMADPKSELFGEMARSIESALDDLFRNSDVKKDFRSVRLQDLGPG
ILVRAIVEAHFDPTTTFRAADVGRALLRQIQASRRRSLVVKRPLQEHMRFMDFDWFPAFF
TPGATTAMAGATTAAHPPSASVTPRTLYPTHTSRPLSRTTAPPTTRRASTAAPSRVPGRR
PLLPGTPRPPQPCDSQPCLHGGTCQDQDAGQAFSCSCPAGRGGTVCETVLRPVVPAFRGH
SFLAFPTLRAYHTLRLALEFRTLEPQGLLLYNGNARGKDFLALTLLGGRVQLRFDTGSGP
AILTSLVPIEPGPWHRLELSRHWRQGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPE
DQATVVLERTSVSTGLQGCIRLLDINNQQLELSSQGPAARSVGVGECGDDPCLPNPCHGD
APCQALDTDMFLCQCPPKRFGPTCADEKSPCLPNPCHGAAPCRILPGDGAKCECPPGREG
ALCQTASERDDSWPFLADFNGFSYLELKGLHTFERDLGEKMTLEVVFLARGPNGLILYNG
QKTDGRGDFVSLALHGRHLEFRYDLGKGAAVIRSKEPVALSTWTRVLLERSGRKGALRVG
DGPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAAAVSTGFDGAIQMVSLKGHQLLTE
ENVLRVVDVSSFMDHPCTRPSGHPCLNGASCLPREATYECLCPAGFSGPNCEKGLIEKSA
GDLDTVAFDGRTYIEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGTATERADYMAL
AIVDGHLQMTYDLGSQPVVLRSTVPVNTNRWLRVKAHRAQREGSLQVGNEAPVTGSSPLG
ASQLDTDGTLWLGGLEKLPAGQGLPKAYSTGFVGCLRDVVVGRRPLHLLEDAVTKPQLRP
CPAP
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtggctttggtgccgtgtgtgagctgagtgcggagggccctggcccagcctcc
tgcgtgtgcaagaagagcgcctgtcccagcgtggtggcgcccgtgtgcggctctgacgcc
tccacctatagcaacgagtgcgagctacagcgggcacagtgcacccagcagcgccgcatc
cgcctgctcagccgtggcccctgtgggtcccgggatccctgcctcaacgtgacctgcagc
tttggcagcacctgcacccgctccgctgatgggcagacggcggtgtgcctgtgccccacc
tcctgcccaggggcctccgagggcacagtgtgtggcagtgatggcactgactaccccagc
gagtgccagctcctgcgccacgcctgcgcccaccaggagaacctctttaaaaagtttgac
ggcccttgcgatccctgccagggcacccctgatgacccgagccgcatgtgccgtgtgaac
cctcgcacaaggcagcctgagatgcttctgcgatccgagagctgccccccacggcaggca
cctgtgtgcggtgacgacggtgtcacctacgagaacgattgcgtgatgggccgcaccggg
gccgcccatggcatccttctccagaaagttcgctctggccagtgccatccacgagaccag
tgcctggagccctgccagtttcatgctgtgtgcctgtcccgccggggtcgcccccgctgt
tcctgtgaccgagtcacttgtgatggcgcctacaggccagtgtgcgcccaggatgggcac
acctatgacaacgagtgctggctccaccaagctgagtgccagcagcagagtgctatcctt
gtgaggcaccggggcccgtgtggccaacccccatcaccgtgcctcggggttcagtgccca
ttcggggcaacttgtgctgtgaagaacggtgaggctgcgtgtgagtgcccgcaggcatgc
ccaggcatctacgaccctgtgtgtggcagtgacggcatcacgtatggcagcacatgcgag
ctggcagccacagcctgcgccctcggccgagagacccatgtggcgagaagagggccctgt
gaccgctgtgggcagtgccgctttggggccttgtgcgaggcggagacggggcgttgtgtg
tgcccctccgagtgtgtggccttggcccagcctgtgtgtggctctgatggacgtacctat
gccagcgagtgcgagctgcacgtggccgcctgcacccaccagatcagccttcatgtggcc
gcagctggacactgccaaacctgtggggacatggtgtgcgccttcggggctgtgtgctcg
atggggcagtgcgtgtgtccacggtgcgagcgccccccacctggccctgtgtgcggcagt
gatggcgtcacctaccatagcgtatgcgagctccgtgaggcctcctgccggcagcagaca
cacattgaggaggctcgggcagggccctgcgagctggccgagtgtggttcaggaggctct
ggctctggggaagatggtgagtgtgagcccgagctgtgccggcagcgtggcggcatctgg
gatgaggactcagaggatgggccatgcgtctgtgacttcagctgccagagcgttctgcgg
aacccggtttgtggctctgatggggtcacctatggcaccgagtgtgagctgaagaaggcc
aagtgcgagtcacagcgagaactgtatgttgcggctcagggagcctgccgaggccctacc
gctgccccactgccacccatggctcccccacactgcacccagaccccctacggctgctgc
caggacaatgtcacggctgcccagggtgtaggcctggctggctgtcccagtgtgtgccag
tgcaaccctcacggcgcctatggtggctcctgtgacccagcctcgggccagtgctcctgc
cgcccgggcgtggggggtatcaagtgcgaccgctgtgagcctggcttttggaacttccgt
ggcatcgtcactgatggccggagtggctgcaccccctgcagctgtgacccccggggcgct
gtacgggatgactgtgagcagatgagcgggctgtgctcctgtaagcctggcgtggcaggc
cccaagtgcgggcagtgtccagatggccgggccctgggccccactggctgtgaagcagac
tctgtggcacctgtgacctgtgcggagatgcgctgtgagtttggagcctcctgcgtggag
gaagctggctctgctcactgtgtgtgcccaacgcccacatgttcagaggccaatgcgacc
aaggtctgtgggtcggacggcatcacctatggtgacgagtgtcagctgaggaccatcgcc
tgccgtcagggcctggacatctccgtccaaagcctcgggccctgccaggactccatcact
cccagcacccgcccgacacctgcagccaccgccaagcctgtcatacacagggcactgccg
gtcccccccagtgcccttcccctgggtcctagtagtacccgccatggccggcccacccct
caaccctcagtgcgaccgtggaccacagccagcatgcccaggaccacaggacggccagca
ctgacagtgccccccacggccttctccatggtggccagcctggccacgtcagcctttggt
gaatcangcagcgccgatggcgggagtggtgacgaggacctgagtggggacctggaggcc
agtggagccggctctgggggacttgagcttcccgaaggtggtgatgctgtgactccagga
ccacccatcgagagggcttcctgctataactcacctctgggctgctgctcagatgggaca
acggcctcgctggacgcggagggctccaactgcccagccaccaaggcgttccagggtgtg
ctggagcttgaggaggttgagggacaggaactcttctatacacctgagatggccgacccc
aagtcagagctgtttggggagatggcgcggagcattgagagtgcgttggatgacctgttc
cggaactcggatgtcaagaaagacttccggagcgtgcgcctgcaggacctggggcctggc
atcttagtccgtgccatcgtggaagcccactttgaccccaccacaaccttcagggcagct
gacgtgggacgggccttgctcaggcagatccaggcatcccgccgcaggtccttggtggtg
aaacggccgctgcaggaacatatgcgtttcatggacttcgactggtttcctgcattcttc
accccgggagccaccactgccatggccggagccactactgctgcccacccgccctctgcc
tctgtgaccccccgaaccctctaccctactcacaccagccggcccctcagcagaaccaca
gcaccccctaccacccgccgggcctccactgctgctccaagccgcgtgcccggacgccga
cccctgctcccaggcaccccacggcccccacagccctgtgactcacagccctgccttcac
ggcgggacctgccaggaccaggatgccggccaggctttcagctgcagctgccccgcaggc
aggggtggcactgtctgtgagacggtgctgcggcctgtagtgccagccttcaggggccac
tccttcctggccttccccacactgcgcgcctaccacacactgcgcctggcacttgagttc
cggactctggagccacaggggctgctgctctataatggcaatgcccgtggcaaggatttc
ctggcactgactctgctggggggccgcgtgcagctcaggtttgacactggctctggaccc
gccatactgaccagcttggtgcccattgagccaggcccctggcaccgcctggagttgtca
cggcactggcgtcaagggacactgtcagtggatggcgagacccctgtacttggtgaaagc
cctagtggcactgatggcctcaacctggacacagacctctttgtgggtggcgtccccgag
gaccaggccactgtggtgttagagcggacctcagtcagcactggccttcagggttgcatc
cgcctactggacatcaacaaccagcagctggagctgagtagtcaggggcctgcagcccgc
agtgttggtgtgggcgagtgtggggatgacccctgcctgcccaacccctgtcatggcgac
gccccatgccaggccctggatactgacatgtttctctgccagtgcccacccaaacgcttc
ggcccaacttgcgccgatgaaaagagcccctgtttgcccaacccctgccacggggcggcc
ccctgccgcatcctgcctggggatggggccaagtgcgagtgccccccgggacgtgagggc
gccctctgccagacagcctcagagcgggatgattcctggccctttctggctgacttcaac
ggcttctcctacctggagctgaaaggcctccacacctttgagcgcgacctgggggagaag
atgacgctggaggtagtcttcctggcccgtggccccaacggcctgatcctctacaatggg
cagaagacagacggccggggggactttgtgtctctggcactacacggccgccacctggag
ttccgatatgacctgggcaagggggcagcggtcatcaggagcaaggagccagtggccctg
agcacctggacccgggtcttgctggagcgcagtggccgcaagggtgccctgcgtgttggt
gatgggccccgagtgctgggggagtccccggtgccgcacacggtcctcaacctgaaggag
ccactctacgttgggggtgcccctgacttcagcaagctggcccgggccgctgctgtgtcc
acaggctttgacggcgccatccagatggtctccctgaaaggccaccagctgctgactgag
gagaacgtgctacgggtggtggatgtctcgtccttcatggaccacccctgcacccggccc
tcaggccacccctgcctcaacggggcctcctgcctcccacgggaggctacttacgagtgc
ctgtgtcctgcgggcttttcagggccaaattgcgagaaagggctgatcgagaagtcagca
ggggacctggacacagtggccttcgatgggcggacctacattgagtacctcaacgctgtg
accgagagtgaaaaggcgctgcagagcaaccactttgagttgagcctgcgcacggaggcc
acgcaggggctggtgctgtggagtggcacggccacggagcgagcagactacatggcgctg
gccattgtggacgggcacctgcagatgacctatgacctgggctcccagcctgtggtgctt
cgctccactgtgcctgtcaacaccaaccgatggctgcgggtcaaggcacacagggcacag
agggaaggctcccttcaggtgggcaatgaggcccccgtaaccggctcctccccactgggc
gcctcgcagctcgacacagacggaaccctgtggcttgggggcctggagaagctgcccgca
ggccaggggctgcctaaggcctacagcaccggcttcgtgggctgcctgcgggatgtggtg
gtgggccggcgcccgctgcacctgctggaggatgccgtcaccaagccccagctgcggccg
tgccctgccccctga
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