KEGG   Loxodonta africana (African savanna elephant): 100662049
Entry
100662049         CDS       T04351                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03250  Viral life cycle - HIV-1
lav05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100662049
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100662049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100662049
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100662049
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-GeneID: 100662049
NCBI-ProteinID: XP_023415681
LinkDB
Position
Unknown
AA seq 401 aa
MSSSPQTPGTRKPMKTLCPDTFTFEFENLPEAYGRNSTYLCFEVKTNTLPSPDFPDSGIF
QNQDQPPGHHAELVFLAWFFKRLRLGECYQVTWYVSWSPCSRCADQVANFLKSHGTVRLR
ILASRLYFSKKLENREGLHRLSQARAEVKIMSLKDFEYCWENFVNHEEKPFQPWMNLDKN
SEGWNAELKNIHRSSESRSQSGQFGSTLLPQEYGRGERNPRDLLTEGIFYQQFNNKHKLK
KPYYKRKTYLCYELNGPQLVKGCFHYEEGHHAESQFIEEIGSMGLDQGRLYFITCYFTWS
PCHSCARKLVSFVKGNSHLCLKIYTSRLYYHWIWKYIQGLQHLQNSDVPVTVMTDREFEY
CWTNFVDNKGMPFEPWEKLDSYSKNIEERLKRILEVRLPPL
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgtccagctcaccgcagactccaggaaccagaaagccaatgaagactttatgtccagat
acattcactttcgagtttgaaaacctaccagaagcctatggccggaattccacctacctg
tgcttcgaagtgaaaacaaatactctgccctcacctgacttccctgactctgggattttt
caaaaccaggaccagcctccaggccaccatgcagaactggtcttcctcgcttggttcttc
aagcgactccgccttggagagtgctaccaagtcacctggtacgtatcctggagcccctgc
tcccgctgcgcggaccaagtggccaacttcctgaagtcacacggcaccgtgaggcttcgc
atccttgcctcccgcctctacttctccaagaaactagagaacagagaagggctccacagg
ctgtcgcaggcaagggcggaggtcaaaatcatgtctcttaaagactttgaatattgttgg
gaaaactttgtgaaccatgaggaaaagccattccagccttggatgaacctggataaaaat
tctgagggctggaacgctgagcttaagaacattcacaggtcatcagaatcaaggagtcaa
agtggccagttcggaagcactcttctgcctcaagaatatggacgaggagaaagaaaccca
agggacctgttaacagaaggcatattctaccagcaatttaacaacaagcacaagctcaaa
aagccctactataagaggaagacctacttgtgctacgagctgaatggcccccaactcgtc
aaaggctgctttcactacgaggaaggtcaccatgcggaaagtcagtttattgaagagata
ggttccatgggcctggaccaaggcaggctctacttcatcacctgctacttcacgtggagc
ccctgtcacagctgtgctcggaaactggtcagttttgtaaagggcaactcccacctgtgc
ctgaaaatttacacctcccgcctctactaccactggatctggaagtatatccaggggctg
cagcatctgcagaattccgatgtccctgtgactgtcatgaccgacagagagtttgagtac
tgctggacaaactttgtggacaacaaagggatgccctttgaaccctgggagaagctggat
tcatacagtaagaacatagaagaacggctcaagagaatcctggaggtgagactgccccca
ctgtaa

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