KEGG   Loxodonta africana (African savanna elephant): 100667431
Entry
100667431         CDS       T04351                                 
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
  KO
K16857  thrombospondin 1
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04015  Rap1 signaling pathway
lav04115  p53 signaling pathway
lav04145  Phagosome
lav04148  Efferocytosis
lav04151  PI3K-Akt signaling pathway
lav04350  TGF-beta signaling pathway
lav04510  Focal adhesion
lav04512  ECM-receptor interaction
lav04820  Cytoskeleton in muscle cells
lav05144  Malaria
lav05165  Human papillomavirus infection
lav05205  Proteoglycans in cancer
lav05206  MicroRNAs in cancer
lav05219  Bladder cancer
Brite
KEGG Orthology (KO) [BR:lav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    100667431 (THBS1)
   04350 TGF-beta signaling pathway
    100667431 (THBS1)
   04151 PI3K-Akt signaling pathway
    100667431 (THBS1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100667431 (THBS1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100667431 (THBS1)
   04148 Efferocytosis
    100667431 (THBS1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    100667431 (THBS1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100667431 (THBS1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100667431 (THBS1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100667431 (THBS1)
   05205 Proteoglycans in cancer
    100667431 (THBS1)
  09162 Cancer: specific types
   05219 Bladder cancer
    100667431 (THBS1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100667431 (THBS1)
  09174 Infectious disease: parasitic
   05144 Malaria
    100667431 (THBS1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lav04131]
    100667431 (THBS1)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lav00536]
    100667431 (THBS1)
Membrane trafficking [BR:lav04131]
 Endocytosis
  Phagocytosis
   Opsonins
    100667431 (THBS1)
Glycosaminoglycan binding proteins [BR:lav00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100667431 (THBS1)
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1
Other DBs
NCBI-GeneID: 100667431
NCBI-ProteinID: XP_010596632
LinkDB
Position
Unknown
AA seq 1169 aa
MGLAWGLGVLLLLQVCGTNRIPESGGDNSVFDIFELTGGSRKGSGRRLVRGPDPSSSAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVV
SNGKAGTLDLSLTVQGKQHVVSVEDVLLATGQWKSITLFVQEDRAQLYIDCEKMENAELE
VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL
ALDNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSNMVLELRGLRTIVTTLQDSIRKV
TEENKELANELRRSPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSNA
TVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTR
TCHIQECDKRFKQDGSWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQLNGKPCEGEARET
KACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCIGDVTENQIC
NKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPAGYSGNGVQCTDVDECKEVPDACFN
HNGEHRCKNTDPGYNCLPCPPRFTGTQPFGQGIEHATANKQVCKPRNPCTDGTHDCNKNA
KCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNL
PNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNH
NPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHN
PDQLDSDSDRIGDTCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGVGDACDHDDDND
GIPDDRDNCRLVSNPDQKDSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETDFRRFQ
MIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGYDEFNAVDFSGTFFINTERDDD
YAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALW
HTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDK
TYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggggctggcctggggacttggtgtcctgctcctcctgcaagtgtgtggcaccaaccgc
attccagagtctgggggagataacagcgtgtttgacatctttgaactcaccggaggttcc
cgcaagggctctgggcgccggctggtgaggggccctgacccctccagctcagctttccgc
attgaggatgccaatctgatcccccctgtgcccgatgacaagttccaggacctagtagat
gctgtgcgggcagagaaggggttcctcctcctggcctctctgcggcagatgaagaagacg
cggggcacgctgctggccctcgagcggaaagaccactctggccaggtcttcagcgtggtc
tccaatggcaaggcgggcaccctggacctgagcctgactgtgcaggggaagcagcatgtg
gtgtcagtggaagacgtgctcctggcaaccggccaatggaagagcatcaccctgttcgtg
caggaggacagggcccagctgtacatcgactgtgagaagatggagaacgctgagctagag
gtccccatccaaagcatcttcaccagggacctggccagcatcgccaggctccgcattgca
aagggaggcgtcaatgacaatttccagggggtgctgcagaatgtcaggtttgtctttgga
accacaccagaagacatcctcaggaacaaaggctgctccagctctaccaacgtccttctt
gctctcgacaatgtggtgaatggttccagccctgccatccgcaccaactacatcggccac
aaaacaaaggacctgcaggccatctgcggcatctcctgtgatgagctgtccaacatggtc
ctggaactcaggggcctgcgcaccatcgtcaccacgcttcaggacagcatccgcaaagtg
actgaagagaacaaggaattggccaacgagctgaggcggtctcctctctgctatcacaac
ggagttcagtacaggaataacgaagagtggactgtggacagctgcaccgaatgtcgctgt
cagaactcagtcaccatctgcaaaaaggtatcctgccccatcatgccctgttctaacgcc
acagttcctgacggagaatgctgcccacggtgttggcccagcgactctgcagatgatggc
tggtctccatggtctgagtggacctcctgctccgtgacctgtggcaatggaattcagcag
cgcggccgctcctgcgatagcctcaacaaccgatgcgagggctcctcagtccagacacgg
acctgccacattcaggagtgcgataaaagatttaaacaggatggcagctggagccactgg
tccccgtggtcatcttgctcggtgacatgtggtgatggtgtgatcacaaggatccggctc
tgcaactctcccagcccccagttgaacgggaagccatgtgaaggggaagctcgagagact
aaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtcaccatgg
gacatctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgcaacaac
cccacaccccaatttggaggcaaggactgcattggtgatgtgacggaaaaccagatctgc
aacaagcaggattgtccaattgatggatgtctgtccaatccctgctttgccggtgccaag
tgtactagctaccccgatggcagctggaaatgtggtgcttgccctgcgggttatagcgga
aatggcgtccagtgcacagatgttgatgagtgcaaagaagtgcccgatgcctgcttcaac
cacaatggagaacacaggtgtaagaacacagaccccggctacaactgtctgccctgccca
cctcgcttcactggcacgcagccctttggccagggcatcgaacacgccaccgccaacaaa
caggtgtgcaagccccgcaacccctgcacagacgggacacacgattgcaacaagaatgcc
aagtgcaactacctcggccattacagcgaccccatgtaccgctgcgagtgcaagcctggc
tatgcaggcaacggcatcatctgcggagaggacacagacctcgacggctggcccaatgag
gacctggtctgtgtggccaatgcaacttaccactgcaaaaaggacaactgtcccaacctt
cccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgtgacgatgac
gatgacaatgataaaattccagacgatcgggacaactgtccattccattacaacccagcc
cagtatgactatgacagagatgatgtgggcgaccgctgtgataactgtccctacaaccac
aacccagatcaggctgacacagacaacaatggggaaggagacgcctgtgcggctgacatt
gatggggatggtatcctcaatgaaagagacaactgccagtacgtgtacaatgtcgaccag
cgggatacggatatggatggggttggagatcagtgtgataactgccccctggaacacaat
ccagatcagctggactctgactcggaccgcattggagatacctgtgacagcaatcaggat
attgatgaagatggccaccagaacaacctagacaactgcccctatgtgcccaacgccaac
caggccgaccacgacaaggatggcgtgggagatgcctgtgaccatgatgatgacaatgat
ggcattcctgatgacagggacaactgcagactggtgtccaatcctgaccagaaggactct
gacggtgatggtcgaggtgatgcttgcaaggatgattttgaccaggacagtgtgccagac
atcgatgacatctgtcctgagaatgttgacatcagtgagactgatttccgccgattccag
atgattcctttagatcccaaaggaacatcccaaaatgatcctaactgggttgtacgccat
cagggtaaagagcttgtccagactgtcaactgtgaccctgggcttgctataggttatgat
gaatttaatgctgtggacttcagtggcacattcttcatcaacaccgagagggatgatgac
tatgccggatttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtggaag
caggtcacccagtcctactgggacaccaaccccacaagggctcaggggtactcaggcctt
tctgtgaaagttgtgaactccaccacaggacctggcgagcacctgcggaatgctctgtgg
catacaggaaacacccctggccaggtgcgaaccctgtggcatgaccctcgtcatataggc
tggaaagatttcactgcctacagatggcgtctcagccaccggccaaagacaggcttcatt
agagtggtgatgtatgaagggaagaagatcatggctgactcgggacctatctatgacaag
acctacgctggtggcaggctagggttgtttgtcttctctcaagaaatggtgttcttctcc
gacctgaaatacgagtgcagagattcctaa

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