Loxodonta africana (African savanna elephant): 100667983
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Entry
100667983 CDS
T04351
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100667983 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
100667983 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lav01009
]
100667983 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lav04040
]
100667983 (TRPC5)
Protein phosphatases and associated proteins [BR:
lav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100667983 (TRPC5)
Ion channels [BR:
lav04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100667983 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
100667983
NCBI-ProteinID:
XP_003414845
UniProt:
G3TJU8
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQIPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRASGPQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGQMSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEARGAAQSRECPLACSSSLHCVSSICSSNSKLLDSSEDVFETWGEACDLLMH
RWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaggtcaactactcaccgtaccgggaccgcattcccctg
caaattgtgagggctgagacagagctctctgcggaggagaaggccttcctcaatgccgtg
gagaagggggactatgccacagtgaagcaggccctacaggaggctgaaatctactacaat
gtcaacatcaactgcatggaccctctgggtcggagtgccctgctcattgccattgaaaac
gagaacttagagatcatggagctactgctgaaccacagcgtgtatgtgggcgatgcattg
ctctatgccatccgcaaggaagtggtgggtgctgtggagcttcttctcagttacaggcgg
cccagtggagagaagcagatccccactctgatgatggacacccagttctcagagtttaca
ccggacatcactcctatcatgctggctgcccataccaacaactatgaaatcatcaaattg
cttgtccaaaaacgggtcactatcccacggccccaccagatacgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgctcccggctaaacatctat
aaggctctggcaagtccctcgctcattgccttatcaagcgaggaccctattctaactgct
ttccgcctgggctgggaactcaaggagctcagcaaggtagagaatgagttcaaggctgag
tatgaagagctctcccagcagtgcaagctctttgccaaagacctgctagaccaagctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccacgacctggccaaactgaaggtggcaatcaaataccaccagaaagag
tttgttgctcagcctaactgccaacagttacttgccaccctgtggtacgatggcttccct
ggatggcggcggaaacactgggtagtcaagcttctgacctgcatgaccattgggttcctg
tttcccatgctgtccatagcctatctgatctcacccaggagcaatcttggactgtttatc
aagaaaccctttatcaagtttatctgccacacagcatcctatctgaccttcctcttcatg
cttcttctggcttctcaacatattgtcaggacagatctccatgtacaagggccacctcca
actgtcgtggaatggatgatattgccttgggttctaggtttcatttggggggaaattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccttgaagattgtggcctatgttaagtat
aatggttctcgtccaagggaggaatgggaaatgtggcacccgaccctgattgctgaagca
ctctttgcaatatccaacattttaagttcgttgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgctgctggatatcctcaaattc
ctctttatctactgcctggtactgctggcctttgccaatggattgaaccaactttacttt
tattatgagaccagagctattgatgagcctaacaactgcaagggaatccgatgtgaaaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattc
ggccttttaaacctctatgtgactaacgtgaaagccagacatgagttcacagagtttgtg
ggagctaccatgtttgggacatacaatgtcatctctctggtagtgctactgaacatgctg
atcgccatgatgaacaactcctatcagcttattgcggatcatgctgatattgagtggaag
tttgcaagaacaaagctctggatgagttattttgatgaaggtggtaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggtaactggttcaacaacacc
ttctgccccaaaagagaccctgatggtagacggagaaggcacaacctgagaagtttcaca
gaacgccatgctgacagcctgatacagaatcaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggctgctatgataagaaattccaaaacaaatgagggattgacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtgcttgacctc
ttaggaaataggaaacatccaaggagaagcttttccactagcagcactgaactctctcag
agggatgacaccaatgatggcagtggtggggctcgggccaaatccaagagtgtgtctttc
aatttaggctgcaagaaaaaggcctgccacgggccacccctcatcagaaccatgccaaga
gccagtggtccccaaggaaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccttcactcaagaaactaggtctcctgttctccaagtttaacggtcagatgtctgaaccc
agttcagagccaatgtacacaatttctgacggaattgttcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcttgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagccaggggcgctgctcagagcagggaatgccct
ctagcctgttccagctctcttcactgcgtatccagcatctgctcctcaaattccaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacttgcttatgcat
agatggggtgatggacaggaagaacaagttacaactcggctctaa
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integrated database retrieval system
