Loxodonta africana (African savanna elephant): 100670036
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Entry
100670036 CDS
T04351
Symbol
SLIT1
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein
KO
K06838
slit 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04360
Axon guidance
lav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100670036 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100670036 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100670036 (SLIT1)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100670036 (SLIT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
EGF
LRR_1
Laminin_G_2
hEGF
LRRCT
Laminin_G_1
LRR_9
LRR_14
EGF_TEN
EGF_3
EGF_Teneurin
EGF_2
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
100670036
NCBI-ProteinID:
XP_023402630
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MVLMPWKGPLAWLVRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP
RSTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQ
LHMLPELLFQNNQALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRAL
RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT
QCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPSCTLSSGSCPAMCTCSNGIVDCRGKGL
TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN
SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQGL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCATPRRLANKRIGQI
KSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEASVVDCASLKLTKIPERIPQ
STAELRLNNNEISILEATGIFKKLTHLKKINLSNNKLSEIEDGAFEGAASVSELHLTANQ
LESIRSGMFRGLDSLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTISPGAFDTL
QSLSTLNLLANPFNCNCRLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAYPDFRCE
EGQEEGGCLPRPQCPQECTCLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQL
STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH
GNDISTXPXGIFADVTPXSHLAIGANPLYCDCHLRWLSGWVKTGYKEPGIARCAGPPDME
GKLLLTTPAKKFECQGPPTLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRN
CEVSLDGCISGPCENGGTCLAQEGDDASFTCSCPTGFEGPTCGVNTDDCVEHACANGGSC
VDGVGNYTCQCPLQYVGKACEQLVDFCSPDLNPCQHDAQCVGTPDGPRCECMPGYTGHNC
SENQDDCGNHRCQNGAQCVDEVNSYSCLCAEGYSGQLCEIPPRPPAPRSPCEGTECQNGA
NCVDQGSQPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFDKHYTLNSEAPLYVGGEDLAQGEVTAIPGWDLFCPLA
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgccctggaaggggcccttggcgtggctcgtccggcccgagctctggctg
ctgctgtgggcagctgcgtggcgcctgggtgccacggcgtgccccgccctctgcacctgc
actggcaccacggtggactgccacggcacggggcttcaggccatccctaagaacatccca
cggagcaccgagcgcctggaactcaatggcaacaatatcactcggatccataagaatgac
tttgcagggctcaagcagctgcgggtgctgcagctgatggagaaccagattggagtggtg
gagcggggggctttcgatgacatgaaggaactggagaggctacgactgaaccggaaccaa
ctgcacatgttaccagaactgctgtttcagaataaccaggctctgtcgagactggacctg
agtgaaaacaccatccaggccatccccaggaaagctttccgaggggctacagacctcaaa
aatttacagctggacaagaaccagatcagctgcattgaggaaggggctttccgggctctg
cgggggctggaggtgctgaccctgaacaacaacaacatcaccaccattcctgtgtccagc
ttcaaccacatgcccaagctccgaaccttccgcctgcactccaaccatctgttctgtgac
tgccacctggcctggctctcgcagtggctgaggcagcggccaaccatcgggctcttcacc
cagtgctcaggccccgccagcctgcgtggcctcaacgtggctgaggtccagaagagtgag
ttcagctgctcaggccagggagaggcggggcgtgtgccctcctgcaccctctcctccggc
tcctgcccggccatgtgcacctgcagcaacggcatcgtggactgtcgcggcaaaggcctc
accgccatccccgccaacctgcccgagaccatgacggagatacgcctggagctcaatggg
atcaagtccatccccccgggtgccttttctccgtaccgaaagctgcggaggatagacctc
agcaacaaccagatcgcggagatagcgcctgatgccttccagggcctccgctccctaaac
tcactggtcctctatgggaacaagatcacagacctcccccggggtgtgtttggaggcctg
tacaccctacagcttctgcttctgaacgccaacaagatcaactgcatccggcctgatgcc
ttccaggacctgcagaacctgtcactgctctccctgtatgacaacaagatccagggtctg
gccaagggcaccttcacctccctgcgggccatccagaccctgcatctagcccagaaccct
ttcatctgtgactgtaacctcaagtggctggcagacttcctgcgcaccaaccccattgag
acgagcggcgcccggtgcgccactccccggcgcctagccaacaaacgcatcgggcagatc
aagagcaagaagttccggtgctcagctaaggagcagtacttcattccaggcactgaggac
taccagctgaacagtgagtgtaacagcgacgtggtctgcccccacaagtgccgctgcgag
gccagtgtggtggattgtgccagcctgaagctcacgaagatccctgagcgcatcccgcag
tccacagctgagttacgtttgaacaacaatgaaatttccatcctggaggccactgggata
tttaaaaaacttacacatctgaagaaaatcaacctgagcaacaacaagttgtcagaaatt
gaagacggggccttcgagggtgctgcctctgtgagtgagctgcacctgaccgccaaccag
ctggagtccatccggagtggcatgtttcggggtctggacagcttgaggaccctgatgctg
aggaacaaccggatcagctgcatccacaacgacagcttcacaggtctgcgcaacgtccgg
ctcctctcgctgtatgacaaccagatcaccaccatctcccccggagccttcgacaccctc
cagtccctctccacgctaaaccttctggccaaccctttcaactgtaactgccggctggct
tggcttggtgactggctgcggaagaggaagattgtgaccgggaacccacgatgtcagaac
ccagatttcttgcggcagatccccttgcaggatgtggcctacccggacttcaggtgtgag
gaagggcaagaggaggggggctgcctgccccgcccgcagtgcccccaggagtgcacctgt
ctggacactgtggtccgatgcagcaacaagcacctccgggccctgcccaagggcatcccc
aagaatgtcacagagctctatttggacgggaatcagtttacactggtcccaggacagctg
tccaccttcaagtacctacagcttgtggatctcagtaacaacaagatcagctccttaagc
aattcctccttcaccaacatgagccagctgaccactctgatcctcagctataacgccctc
cagtgcatccctcccctggccttccaggggctccgctccctgcgcctgctgtccctccat
ggcaacgatatctccaccnctccgtgagggatcttcgcagacgtgactccctgaagccat
ctggccattggtgccaaccccctgtactgtgactgccacctccgctggctgtctggctgg
gtgaagacgggctataaggagccgggcattgcccgctgtgctgggcccccagacatggag
ggcaagctgctcctcaccacaccggccaagaagtttgaatgccaaggtccccccactctg
gctgtccaggccaagtgtgatccctgcttgtccagcccatgccagaaccagggcacctgc
cataatgatccccttgaggtgtacaggtgtgcctgccccagcggctacaagggccgcaac
tgtgaggtatccctggatggctgtataagcggcccctgtgaaaatggtgggacctgcctt
gcacaggagggtgacgatgctagcttcacgtgctcctgtcccactggctttgagggaccg
acctgtggggtgaacacagatgactgtgtggagcacgcgtgtgccaacgggggcagctgt
gtggacggcgtgggcaactacacctgtcagtgccccctgcagtatgtgggaaaggcctgt
gagcagctggtggacttctgctccccggatttgaacccgtgtcagcacgatgcccaatgt
gtaggcaccccagatggccccaggtgtgagtgcatgccaggttacacaggccacaactgt
agtgagaaccaggacgactgtgggaaccaccgctgccagaacggagcccagtgcgtggac
gaagtcaacagttactcctgcctctgtgccgagggctacagcggacagctctgtgagata
cctccccgcccacctgcccccaggagcccctgtgaggggactgagtgccagaatggggcc
aactgtgtggaccagggcagccagcccgtgtgccagtgtctccccggcttcggtggcccc
gagtgtgagaagttgctcagtgtcaactttgtggaccgagatacttaccttcagttcact
gatctgcagaattggcctcgggccaacatcacgctccaggtctccacggcagaggacaat
gggatcctactgtacaacggagacaatgaccacatcgcggttgagctgtaccagggccac
gtgcgcgtcagctacgacccaggcagctaccccagctctgccatctacagtgccgagaca
atcaatgacgggcagttccacaccgttgagctggtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaactttgacaaacactacacgctaaac
agcgaggcccccctttatgtgggaggtgaggacctggctcagggggaggtgacagcaatt
ccagggtgggacctattttgccctctggcttga
DBGET
integrated database retrieval system
