KEGG   Loxodonta africana (African savanna elephant): 100671471
Entry
100671471         CDS       T04351                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04010  MAPK signaling pathway
lav04064  NF-kappa B signaling pathway
lav04120  Ubiquitin mediated proteolysis
lav04140  Autophagy - animal
lav04144  Endocytosis
lav04380  Osteoclast differentiation
lav04620  Toll-like receptor signaling pathway
lav04621  NOD-like receptor signaling pathway
lav04622  RIG-I-like receptor signaling pathway
lav04657  IL-17 signaling pathway
lav04722  Neurotrophin signaling pathway
lav04936  Alcoholic liver disease
lav05132  Salmonella infection
lav05133  Pertussis
lav05135  Yersinia infection
lav05140  Leishmaniasis
lav05142  Chagas disease
lav05145  Toxoplasmosis
lav05152  Tuberculosis
lav05160  Hepatitis C
lav05161  Hepatitis B
lav05162  Measles
lav05168  Herpes simplex virus 1 infection
lav05169  Epstein-Barr virus infection
lav05170  Human immunodeficiency virus 1 infection
lav05171  Coronavirus disease - COVID-19
lav05200  Pathways in cancer
lav05222  Small cell lung cancer
lav05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
lav05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100671471 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100671471 (TRAF6)
   04064 NF-kappa B signaling pathway
    100671471 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100671471 (TRAF6)
   04140 Autophagy - animal
    100671471 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100671471 (TRAF6)
   04621 NOD-like receptor signaling pathway
    100671471 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    100671471 (TRAF6)
   04657 IL-17 signaling pathway
    100671471 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100671471 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100671471 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100671471 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100671471 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100671471 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100671471 (TRAF6)
   05161 Hepatitis B
    100671471 (TRAF6)
   05160 Hepatitis C
    100671471 (TRAF6)
   05171 Coronavirus disease - COVID-19
    100671471 (TRAF6)
   05162 Measles
    100671471 (TRAF6)
   05168 Herpes simplex virus 1 infection
    100671471 (TRAF6)
   05169 Epstein-Barr virus infection
    100671471 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100671471 (TRAF6)
   05135 Yersinia infection
    100671471 (TRAF6)
   05133 Pertussis
    100671471 (TRAF6)
   05152 Tuberculosis
    100671471 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100671471 (TRAF6)
   05140 Leishmaniasis
    100671471 (TRAF6)
   05142 Chagas disease
    100671471 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100671471 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100671471 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lav04131]
    100671471 (TRAF6)
   04121 Ubiquitin system [BR:lav04121]
    100671471 (TRAF6)
Enzymes [BR:lav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100671471 (TRAF6)
Membrane trafficking [BR:lav04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    100671471 (TRAF6)
Ubiquitin system [BR:lav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100671471 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF6_Z2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 U-box TRAF3_RING zf-RING_11 SlyX RING_XB3-XBAT31 zf-TRAF DUF7310 Sina_ZnF ATG16 DUF3450 DUF16 Spc29 AAA_13 DUF1664
Other DBs
NCBI-GeneID: 100671471
NCBI-ProteinID: XP_023406685
LinkDB
Position
Unknown
AA seq 516 aa
MSLLNCENSCGSSQPDGDCCAAMASSCSATTKDDSVSGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLKVKCPNAGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKCHLNIHVLK
ECPRRQVSCVNCAILMAFEDKEIHDQNCPLANVICEYCNTMLIREQVMQRNHLARHLQEN
TQSHMRMLAQAVQNLSLALTPRPQCDMLPYDSASLSRVSSGCHPEVQNFQETIQQLEGRL
VRQDHQIRELTAKMETQSMYVGELKRTIRTLEDRIAEIEAQECNGIYIWKIGNFGMHLKC
QEEEKPVVIHSPGFYTGKPGYKMCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPF
QGTIRLAILDQSETPVRQNHEEIMDTKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRT
FVKDDTLLVRCEVYSRFDMGSLRREAFQPRSTDAGV
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtggatccagccagcctgacggtgactgttgt
gctgccatggccagctcctgtagtgccacaaccaaagatgacagtgtgagtgggacagcc
agcacagggaacctctccagttcctttatggaagagatccaggggtatgatgtggagttt
gacccacccctggaaagcaagtatgaatgccccatctgtctgatggcattgcgggaagca
gtgcaaacaccatgtggccacagattctgcaaagcctgcatcaccaaatcgataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggagaatcagctatttcctgat
aattttgcaaaacgagagattctttctctgaaggtgaagtgtccaaatgcaggttgtttg
cacaagatggagctgaggcatctagaggatcatcaagcacattgtgagtttgctcttatg
gattgtccccaatgccaacgtcccttccaaaaatgccatcttaatattcacgttctcaag
gagtgtccaaggaggcaggtttcctgtgtgaactgtgctatattaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc
atgctcatcagagaacaggtaatgcagaggaatcacttggcacgccacctgcaagagaac
acccagtcgcacatgagaatgttggcccaggcggttcagaatttaagccttgctttaact
cccaggcctcagtgtgacatgcttccgtatgattctgcctctctgtcccgagtgtcctcc
ggatgtcacccagaggtccagaacttccaagaaaccattcagcagttagaaggtcgcctc
gtcagacaagaccatcaaatccgggagctgactgctaaaatggaaactcagagcatgtac
gtaggtgagctcaaacgaaccattcgaacccttgaggacagaattgctgaaatagaagca
caggagtgcaatgggatttacatctggaagattggcaactttgggatgcacttgaaatgc
caagaagaggagaaacccgttgtcattcacagccccggattctacactggcaaacccggc
tataagatgtgcttgcgcctgcacattcagctgccaaacgcccagcgctgtgcaaactac
atctccctctttgtccacacaatgcaaggagagtatgacagccacctgccctggcccttc
cagggtacaatacgccttgcaattctagatcagtccgaaacacctgtaaggcaaaaccac
gaagagatcatggataccaaaccagagctgcttgccttccagcgacccacaatcccacgg
aacccaaaggggtttggctatgtaacttttatgcacctagaagcgctaagacaaagaacc
ttcgttaaggatgataccttactagtgcgctgtgaggtctatagccgcttcgacatgggt
agccttcggagggaggcctttcagccacgaagtactgatgcaggggtatag

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