Loxodonta africana (African savanna elephant): 100672180
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Entry
100672180 CDS
T04351
Symbol
KDM2A
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100672180 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lav03000
]
100672180 (KDM2A)
04121 Ubiquitin system [BR:
lav04121
]
100672180 (KDM2A)
03036 Chromosome and associated proteins [BR:
lav03036
]
100672180 (KDM2A)
Enzymes [BR:
lav01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100672180 (KDM2A)
Transcription factors [BR:
lav03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100672180 (KDM2A)
Ubiquitin system [BR:
lav04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100672180 (KDM2A)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100672180 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100672180 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
100672180
NCBI-ProteinID:
XP_023415319
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MDLKNVAQGRTQNPCIEEQNNHGLYHHALTCSCHTNGLQLQQLQKRGTMRRRYEDDGISD
DEIEGKRTFDLEEKLHTNKYNANFVTFMEGKDFNVEYIQRGGLRDPLIFKNSDGLGIKMP
DPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQWTRYYETPEEEREKLYNVISLEFS
HTRLENMVQRPSTVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVRGCYT
DFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGKQGDIFLGDRVSDCQRIE
LKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFY
YEMCWYVLERYVYCITNRSHLTKEFQKESLSMDLELNGLESGNGDEDAAADREPRRLSSR
RSILTSPVANGVNLDYDGLGKASRSLPSLKKTLAGDTSSDSSRGSHNGQVWDPQCSPRKD
RQVHLTHFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKVLLEELANSDPKLAL
TGVPIVQWPKRDKLKFPTRPKVRVPTIPITKPHTMKPAPRLTPVRPAAASPIVSGARRRR
VRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQ
NEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDSSEKAQKRK
MEESDDEAVQAKVLRPLRSCDEPLTPPPHSPTSMLQLIHDPVSPRGMVTRSSPGAGPSDH
HSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKIRGSYLTVTLQRPTK
ELHGTSIVPKLQAITASSANLRHSPRVLVQHCPARAPQRGDEEGLGGEEEDEEEAEEDED
SAEEGGAARLNGRGSWAQDGDESWMQREVWMSVFRYLSRRXLCECMRVCKTWYKWCCDKR
LWTKIDLSRCKAIVPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNRLPGLKDLLLAGCS
WSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQDNRSKLRNMTDFRLAG
LDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSSTRYSLTELNMAGCNKLT
DQTLIYLRRIANVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaaaacgtggcccagggtcgtactcagaatccttgcatagaggaacagaat
aaccacggcctgtatcatcatgcattaacatgcagctgtcatactaatggcttacagttg
cagcagctacagaagcgtggcaccatgaggcggcgctatgaggatgacggcatttcagat
gatgagattgaagggaagagaacctttgacttggaagagaaactgcacaccaacaaatac
aacgcaaattttgttacttttatggagggaaaagattttaatgtagaatatatccagcgg
ggtggcttgagagaccctctgattttcaagaattctgatggccttggaataaagatgcca
gatccagacttcactgtgaatgatgtcaaaatgtgtgtggggagccgtcgcatggtggat
gtcatggatgtgaacacacagaagggcattgaaatgaccatggctcagtggacacgctac
tatgagaccccagaggaggaacgagagaaactctataatgtcatcagcctggagtttagc
cacaccaggctggagaacatggtgcagaggccctccacggtggatctcattgactgggta
gacaacatgtggccacggcatttgaaggaaagtcagactgaatcaacaaacgccattctg
gagatgcagtacccaaaagtacagaagtactgtctaatgagtgttcgaggctgctatact
gacttccacgtggactttggtggtacctctgtttggtaccatatccatcaagggggaaag
gtcttctggctcatcccccctacagcccacaacctggagctgtacgagaattggctgctg
tcagggaaacagggagacatctttctgggtgaccgggtgtcagattgccagcgcattgag
ctcaagcagggctataccttcgtcattccctcaggatggattcatgctgtgtatactcct
acagatacattagtgtttggaggcaattttctgcatagcttcaatatccctatgcaatta
aaaatatacaacattgaagatcggactcgggttccaaataagttccgctacccattctac
tatgagatgtgttggtacgtgttggaacgctacgtgtactgcataaccaaccgctcccac
ctcactaaggagtttcagaaagagtcccttagcatggatttggagttaaatgggttggag
tccggaaatggggatgaggacgctgcagcggatcgagaaccccggcgcttgagcagtagg
cgttctattctgacgagccctgtagctaatggggtcaacctggattatgacggactgggc
aaagccagccgaagtcttccaagcctgaagaaaaccttggccggtgacacatcctctgac
tctagccggggttcccacaatggccaggtgtgggacccccagtgtagcccccgaaaggac
aggcaggtgcatctgacccattttgagcttgaagggcttcgctgccttgtagataagttg
gagtctctgccactgcacaagaagtgtgtccccacggggatagaagatgaagacgccctc
attgcggatgtaaaggttttgctggaggagcttgccaacagtgatcccaagttagccctc
actggagtccccatagtacagtggccaaaaagggataagcttaaattccccacccggcca
aaggtgcgggttcctaccatccccatcacaaagcctcacactatgaagccagctccgcgg
ttaacacctgtgaggccagctgctgcctcccccattgtatcaggagccagacggagacga
gtgcggtgtcgaaaatgcaaagcctgtgtgcaaggagaatgtggcgtttgccactactgc
agggacatgaagaagtttggggggcctggtcgcatgaagcagtcctgtgtcctccggcaa
tgcttggcacctagactgcctcactccgtcacgtgttccctctgtggtgaggtggatcag
aatgaagagacacaggactttgagaagaaactcatggaatgttgtatctgcaacgagata
gttcatcctggctgcctccagatggatggagaggggttgcttaacgaggagttgccaaat
tgctgggagtgtccgaaatgctaccaggaggacagctctgagaaagcccagaagcggaaa
atggaagagagtgacgatgaagccgtgcaagccaaagtcctgcggcctctgcggagctgc
gatgagcccctcacgcccccgcctcactcacccacttccatgctgcagctcatccatgac
ccggtttctccccggggtatggtgactcggtcatcacctggggctggccccagtgaccac
cacagtgccagccgcgatgagcgcttcaaacggcggcagttgctgcgactgcaggccaca
gagcgcaccatggtacgggaaaaggagaacaatcccagtggcaaaaaggagctgtctgaa
gttgagaaagccaagatccggggatcgtacctaactgtcacgctacagaggcccaccaaa
gagctccatgggacatccattgtgcccaagctgcaggccatcacggcttcttctgccaac
cttcgccactccccccgtgtgctggtgcagcactgcccagcccgagccccccagcgtggg
gatgaggaggggctggggggagaggaggaggacgaggaggaggcggaagaggatgaggac
agtgccgaggaggggggtgcggccaggctgaacggccggggcagttgggctcaggacgga
gacgagagctggatgcagcgggaggtctggatgtctgtcttccgctacctcagccgcaga
ngactttgtgaatgtatgcgcgtgtgcaagacgtggtataaatggtgctgcgacaagaga
ctttggacaaaaattgacttgagcaggtgtaaggctattgtaccccaggctctcagcggc
atcatcaagaggcagccggtcagcctcgacctcagttggaccaacatctccaaaaagcaa
ctgacgtggcttgtcaacaggctgccaggactgaaagacctcctcctggcgggctgctcc
tggtctgccgtctcagccctcagcacgtccagctgcccccttctcaggaccctggatctt
cggtgggcagtaggaatcaaggaccctcaaattcgggacttgctaactccaccagctgat
aaaccaggccaggacaatcgcagcaagctccggaacatgaccgacttccggctggcaggc
cttgacatcacggatgccacgcttcgcctcatcatccgccacatgcccctcctgtctcga
ctcgacctcagtcactgcagccaccttacagaccagtcctccaatttgctcaccgccgtc
gggtcttccactcgttactccctcactgagctcaacatggcaggttgcaataaattgaca
gaccagaccctgatctacctacggcgtatcgccaatgtcactttgattgaccttcgagga
tgcaagcagatcactcggaaagcctgcgagcacttcatctcagacttgtccatcaacagc
ctctactgcctgtctgatgagaagctgatccagaaaatcagctaa
DBGET
integrated database retrieval system
