KEGG   Loxodonta africana (African savanna elephant): 100673372
Entry
100673372         CDS       T04351                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100673372 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lav03041]
    100673372 (SMNDC1)
Spliceosome [BR:lav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100673372 (SMNDC1)
 Complex B
    100673372 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100673372 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100673372
NCBI-ProteinID: XP_003409171
LinkDB
Position
Unknown
AA seq 262 aa
MFIIFRIHCLQVCGLAHNFELKVKMSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLK
KDLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEE
IDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMLAQQREYKKKK
ALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGI
ADKPMTQYQDTSKYNVRHLMPQ
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtttataatcttcagaatccattgccttcaagtttgtggtttggctcacaactttgaa
ctaaaagtaaagatgtcagaggatctagcaaagcagctggcaagctataaagctcaactc
cagcaagtcgaagctgcattatctggaaatggagaaaatgaagatttgctaaaattgaaa
aaagatttacaggaagttatagaactaaccaaagaccttctttcaactcaaccttcggaa
actcttgcaagttcagacagttttgcttctacacagcctactcattcatggaaagtagga
gacaagtgtatggcaatctggagtgaagatggacagtgttatgaagcagagattgaggag
atagatgaagaaaatggcaccgctgcaatcacctttgctggctatggtaatgctgaagtg
actccactgttgaacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggc
aacaaacccatgtcgaaaaaagaaatgcttgcccagcagcgtgaatataaaaagaagaaa
gctttgaaaaaagcacagagaataaaagaacttgagcaggaaagagaggaccagaaggtg
aaatggcaacaattcaacaatagagcctattctaaaaacaaaaaaggccaggtaaagagg
agtatttttgcttcacctgagagtgtaactggcaaagttggagtaggaacttgtggaatt
gctgataaacctatgacacagtatcaggatacctctaaatacaacgttaggcatttgatg
cctcaataa

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