Loxodonta africana (African savanna elephant): 100676190
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Entry
100676190 CDS
T04351
Symbol
GSDMD
Name
(RefSeq) gasdermin-D isoform X2
KO
K20917
gasdermin-D
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04613
Neutrophil extracellular trap formation
lav04621
NOD-like receptor signaling pathway
lav04623
Cytosolic DNA-sensing pathway
lav05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100676190 (GSDMD)
04621 NOD-like receptor signaling pathway
100676190 (GSDMD)
04623 Cytosolic DNA-sensing pathway
100676190 (GSDMD)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100676190 (GSDMD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lav02000
]
100676190 (GSDMD)
Transporters [BR:
lav02000
]
Other transporters
Pores ion channels [TC:
1
]
100676190 (GSDMD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
100676190
NCBI-ProteinID:
XP_003422463
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MPSSFSGVVRSVVRELDRTGELIPVDSLRSSTSFQPYCLVSRKPSTSWFWRSRYTSVNLS
IRDILDPNAPEPGVQCRGPFHFHDTMDGRVQGSVELAAPGQGRIKGGATVSGSSSASMDV
FTLRVDPSTWETLHKERRLRQPEHKILQQLRNRGDNVYVVTEALQTQKEVEVTRTHKQEG
SGQFALPGVTCLQGEGQGHLSRKKTVTIPSGSILAFQVAKLVIGPDWDILLLPDKKQRTF
QKPPADGPTEERAVVTKDFAGLRAEVEPQAQELENLSKELRQEMLGALGRLLLDTPALQD
LEEALEQGLCCGRVEPRDGPVGTVLECLVLPSQELVKDLAIPVFYLLGALTALSETQHLL
VAQALETRALPRQLELVGSVLKQSSPWQEPRAVSLPPGLLGSSWGEDAPAWVLLEECGLE
LQVGPPQACWDPEAQGHTCALYAALALLLRLGQEPC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtccttcagcggtgtggtccgcagcgtggtccgggagctggatcgcactggg
gagctcattcccgtggacagcctgcggagttccaccagcttccagccctactgcctggtg
agcaggaagccctcaacctcctggttctggagatcccgctacacgtctgtcaatctgtcc
atccgagacatcctagatcccaatgccccggaaccaggtgtgcagtgcagaggccccttc
cacttccacgacaccatggatgggcgggtgcagggcagcgtggagctggcagctcctgga
cagggcaggatcaaaggcggagcaactgtgtctggcagctccagcgcctcgatggacgtg
ttcacactgcgcgtggatcccagcacttgggaaaccctgcacaaggaaagacgcctgcgg
cagccggagcacaaaatcctgcaacagctgcggaaccgcggggacaatgtgtatgtggtg
acggaggcgctgcagacacagaaagaggtggaggtgacgcgcacccacaagcaggagggc
tcaggccagtttgcactgccaggagtcacgtgcctgcagggcgagggccagggccacctg
agccggaagaagacggtcaccattccttctggcagcattcttgccttccaggtggcgaag
ctcgttattggccctgactgggacatcctcctccttccggacaagaagcagagaaccttc
cagaagcccccagcagacgggccaacagaggagcgggcagtggtcaccaaggactttgcg
ggcctgagggcagaggtggagccccaggcacaggagctggagaacctgagcaaagagctg
cggcaggagatgctgggggccctggggaggctgctcctggacacaccggcattacaggac
ctggaggaggcgctggagcagggcctgtgctgcgggcgggtggagccgcgggacgggcca
gtaggcactgtccttgaatgcctggtgctgccctcccaagaactggtgaaggacttggcc
atccctgtcttctacctgctgggagctctgactgctctgagtgagacccagcacctgctg
gtggcccaggcgctggagacgagggccctgccgaggcagcttgagctggtggggagcgtc
ttgaagcagagctccccgtggcaggagcccagggctgtgtccctgccaccagggctcctg
gggagcagctggggcgaggatgcccctgcctgggtcctgctggaggagtgtggcctggag
ctgcaggtgggccccccccaggcgtgctgggatcccgaggcccaaggccacacttgtgca
ctctacgccgccctggcgctgctgctacggctgggccaggagccttgctag
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