Novilysobacter avium: INQ42_08590
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Entry
INQ42_08590 CDS
T08144
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lavi
Novilysobacter avium
Pathway
lavi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
INQ42_08590 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_08590 (nth)
Enzymes [BR:
lavi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
INQ42_08590 (nth)
DNA repair and recombination proteins [BR:
lavi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
INQ42_08590 (nth)
Prokaryotic type
INQ42_08590 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QOW23357
LinkDB
All DBs
Position
1906123..1906782
Genome browser
AA seq
219 aa
AA seq
DB search
MFARLRQLNPEPTTELEFSSPYELLVAVTLSAQSTDVGVNKATRKLFPVANTPAAIAALG
VEGLKPYIATIGLYNTKAANVVAMAELLLERHDGQVPNDRAALEALPGVGRKTANVVLNT
AFGEPTMAVDTHIFRVSNRTGLAPGRNVREVEDLLVRVIPDEYLRDAHHWLILHGRYVCK
ARTPDCPHCVIRDICRYRDKTPGEPEAPLDAVGARQGRG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccggctgcgccagctcaacccggaaccgaccaccgagctggaattttccagc
ccctacgagctgctggtggcggtgaccctgtcggcccagtccaccgacgtgggcgtcaac
aaggcgacccggaagctgttccccgtcgccaatacgccggcggcgatagcggccctcggc
gtggaaggccttaagccgtacatcgcgaccatcgggctctacaacaccaaggcggccaac
gtcgtggccatggccgagctgctgttggaacggcacgacggccaggtgcccaacgaccgc
gcggcgctggaggccctgcccggcgtcggccgcaagaccgccaacgtggtgctcaacacc
gcgttcggcgaaccgacgatggccgtggatacccacatcttccgggtgtccaaccgcacc
ggcctggcgccgggcaggaatgtgcgcgaggtggaggacctgctggtgcgggtgattccc
gacgagtacctgcgcgacgcgcaccactggctgatcctgcacgggcgctacgtgtgcaag
gcgcgcacgcccgactgcccgcattgcgtgatccgcgacatctgccgctaccgcgacaag
acgcctggggaaccggaggcgccactggacgccgtgggcgcgcggcagggtcgcggctga
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