Lysobacter avium: INQ42_09960
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Entry
INQ42_09960 CDS
T08144
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lavi
Lysobacter avium
Pathway
lavi00300
Lysine biosynthesis
lavi00550
Peptidoglycan biosynthesis
lavi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
INQ42_09960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
INQ42_09960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lavi01011
]
INQ42_09960
Enzymes [BR:
lavi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
INQ42_09960
Peptidoglycan biosynthesis and degradation proteins [BR:
lavi01011
]
Precursor biosynthesis
Amino acid ligase
INQ42_09960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PA
Motif
Other DBs
NCBI-ProteinID:
QOW23384
LinkDB
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Position
complement(2205102..2206613)
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AA seq
503 aa
AA seq
DB search
MPKLRVPQAHPRRMPLAELLPDVAGIPAGLEISGLVQDSREIRAGDAFVAIGGFGTHGLK
FVEQARAANAAVILYEPPASADTPAPADAIAVPGLRSRMGAMADRFHARPSAAMRMVGVT
GTNGKTSTVQLLAQAWQLLGVRGASIGTLGVGFDGALVPTGFTTPLVLNVHALLAGLRDG
GAEAVAMEVSSHALDQGRVDGVHFDVGVFTNLSRDHLDYHGDMDTYAAAKARLLAWPGLQ
AAVVNLDDAHGRAMQAALPASVNAIGVSSRGNALAAIQADDVQLDNAGATFQLVFHAQQG
GQRHPVRSALLGRFNVDNLLAVAGALLGLGVAPQDIATALNQLRPIHGRMNRLGGTDGKP
LVVVDFAHTPDALEQALASLRDHVTGRLWCVFGCGGERDRGKRPQMAAIAEAGADAVVVT
DDNPRHEDGDAIVADILAGFAQPADVVVLRDRAAAIAHAVGRAGADDIVLIAGKGHEPDQ
DITGVKHPFDDTQVARAALERRA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagctgcgcgttccgcaggcacatccgcgccgcatgccactggccgaactgctg
ccggacgtggccgggattccggccgggctggaaatctctggcctggtccaggacagccgc
gagatccgcgccggcgacgccttcgtggcgatcggcggctttggtacccacgggctgaag
ttcgttgagcaggcgcgcgctgcgaacgcggcggtgatcctctacgagccgcccgccagc
gccgacacgccggcgccggcggatgcgatcgccgtgcccggcctgcgctcgcgcatgggc
gcgatggccgaccgcttccacgcccggcccagcgccgcgatgcggatggtcggtgttacc
ggcaccaacggcaaaacctccacggtccagttgctggcccaggcctggcagttgttgggc
gtgcgcggcgccagcatcggcaccctgggcgtcggcttcgacggtgcgctggtgccgacc
gggttcaccacgccgctggtgctcaacgtgcacgcgttgctggccggcctgcgcgacggc
ggcgccgaagcggtcgcgatggaagtcagctcgcacgccctggaccagggccgtgtcgat
ggcgtccatttcgacgtgggcgtgttcaccaacctcagccgcgaccacctcgactaccac
ggcgacatggacacctacgcggcggccaaggcgcgcctgctggcctggccgggactgcag
gcggcggtggtcaatctggacgatgcgcacggacgcgcgatgcaggcggcgctccccgcc
agcgtcaatgcgatcggcgtgagttcgcgcggcaatgcgttggcggcgatccaggccgat
gacgtgcagctcgacaacgccggcgccacgttccagctcgtgttccacgcgcagcagggc
gggcagcgccacccggtgcgttcggcgctgttgggccggttcaacgtggacaacctgctg
gcggtcgccggcgcgctcctcgggctgggggtcgcgccgcaggacatcgcgaccgcgctg
aaccagttgcgtccgatccacggccgcatgaaccgccttggcggcacggatggcaagccg
ctggtggtggtcgacttcgcccacacgcccgatgcgctggagcaggcgctcgcgtccctg
cgcgaccacgtcaccggccgtctgtggtgcgtgtttggttgcgggggcgagcgcgaccgc
ggcaagcgcccgcagatggcggcgatcgccgaggccggcgccgacgcagtcgtggtcact
gatgacaacccgcgccacgaggacggcgatgcgatcgtggccgacatcctcgccgggttt
gcccagcctgcggacgtggtcgtgctgcgcgaccgggccgccgcgattgcacatgcggtc
ggccgggccggggcggacgacatcgtgctgatcgccggcaagggccacgagcccgaccag
gacatcaccggcgtcaaacacccctttgatgacacgcaggtcgcccgcgcggcactggag
cgccgggcatga
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