Lycium barbarum (goji berry): 132599227
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Entry
132599227 CDS
T09483
Name
(RefSeq) 4-coumarate--CoA ligase 2
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00130
Ubiquinone and other terpenoid-quinone biosynthesis
lbb00940
Phenylpropanoid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
lbb_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
132599227
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
132599227
Enzymes [BR:
lbb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
132599227
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
132599227
NCBI-ProteinID:
XP_060168495
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Position
1:complement(156486188..156494931)
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AA seq
545 aa
AA seq
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MTMEKETKQVDKIFRSKLPDIYIPNHLPLHSYCFENISEFSSRPCLINGANNQIYTYADV
ELSSRKVAAGLHKKFGIQQKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTSAEVV
KQAKASNAKIIVTQACHANKVKDYALENDVKIVCIDSAPEGCFHFSELIQADEHDIPEVE
IQPDDVVALPYSSGTTGLAKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFH
IYSLNSVLLCGLRVGAAILIMQKFDIVPFLELIQNYKVTIGPFVPPIVLAIAKSPMVDNY
DLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEGFEIKS
GACGTVVRNAEMKIVDPDTGISLPRNQSGEICIRGDQIMKGYLNDPEASARTIDKEGWLH
TGDIGYIDNDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMNDEQAGE
VPVAFVVRKIGSTITQDEVKEFVSKQVIFYKRIKRVFFVDAVPKSPAGKILRKDLRAKLA
AGYPN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggagaaggaaacaaaacaagttgataaaattttccgatcaaagctccctgat
atttacatcccgaatcatcttccattacactcgtactgcttcgaaaacatttcggaattt
agttcacgtccgtgtttaatcaacggagccaacaatcaaatttacacgtacgccgatgtt
gagctcagttcaagaaaagttgctgccggccttcacaagaaatttggaatccaacaaaag
gacaccatcatgatcctattgcccaattctccagaatttgtatttgctttcattggtgca
tcgtaccttggagctatttcaacaatggccaatcctttgtttacgtccgctgaggttgtg
aagcaagctaaggcttctaatgctaagatcattgtcacgcaagcttgtcatgcgaacaag
gtgaaggattatgcgttagagaatgatgtgaagatcgtgtgcatcgactcggcgccggag
ggttgtttccacttctccgagttaattcaggccgatgagcacgatatccctgaggtagaa
attcagccagacgatgtggtggcgttgccgtattcctccgggacgaccggtttagctaaa
ggggtgatgttgacacacaagggacttgtcacaagcgtggcacaacaagttgatggtgaa
aatccgaatttgtatatccatagtgaggacgtgatgctttgtgtgttgcccttgtttcat
atctactccctcaactccgttttgctatgtgggttaagggttggtgccgccattctgatt
atgcagaaatttgatattgttccattcttggaattgatacaaaattacaaggtcacaata
gggccatttgtgccaccaattgttttggccattgctaagagtccaatggttgataattac
gatctttcatcagtaagaaccgttatgtcgggggctgcaccattaggaaaggaacttgaa
gacactgttcgagccaaatttcctaatgctaaacttggtcaaggttatgggatgacagaa
gctggaccagtgcttgcaatgtgtttggcatttgcaaaagaaggctttgaaataaaatca
ggagcatgtggtacagttgtgagaaatgctgagatgaaaattgtggatcctgatactggc
atttctcttcccagaaaccaatctggagaaatttgtattagaggggaccagatcatgaaa
ggttacctaaatgacccggaggccagtgcacgaacaatagacaaagaagggtggttacat
acaggtgacattggttatattgacaacgatgatgaacttttcattgtggatcgattaaag
gaacttataaaatacaaaggatttcaagttgcacctgctgaactcgaagcccttctcctc
aaccatcctaacatttccgatgctgctgttgttcccatgaatgacgagcaagcgggagaa
gttccagtggcatttgttgttagaaaaattggatccactattactcaagatgaggtcaag
gaattcgtatcaaagcaggtgatattttataagaggataaagcgggtattttttgtggat
gctgttcctaaatctccagctggcaaaatccttagaaaggacttgagagctaaactagct
gctggatatccaaattaa
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