Lycium barbarum (goji berry): 132610230
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Entry
132610230 CDS
T09483
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132610230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132610230
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132610230
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
132610230
NCBI-ProteinID:
XP_060180515
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Position
9:complement(23285613..23294234)
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AA seq
528 aa
AA seq
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MNHSVPDFDMDDDYSIPTSSGLTRPKKSAMAEEGIMELLWQNGQVVMQSQNQRSLKKSTH
IGNGVGGGDAVIPSDGREIRHVEETTTTTPVQHLFMQEDEMASWLHYDDSPFERDLYADL
LYSTPSSTVTAAAPPQQQIRPPPPPPPAAPIATAAPRPPIPPSRRFQNFGHFSRLPRTRL
EPANSSKRDATVADSNETPITVGQESRVSHIADNVVPAPAGNVTATTSTAIREPVPTCEV
SVTSSPGGSGNSVSGSAEPPPPPGPPHKAADMAAAGDDRKRKGRETDNGEGGQNEDAEFE
SPDTKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKTDKASMLDEA
IEYLKSLQLQVQMMSMGCGMVPMMYPGMQQYMPPMGMGMGMGMGMEMGMNRPMVPYPPLL
PGAAMQNAAAAAQMGPRFAMPPFHLPPVPVPDPSRMQASSQPDPMLNPLVAHNPNQPRLP
NFNDPYQQFFGLHQAQIALQQNQAVEQPSNNKSSSSKEVGNPGNHQSG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactctgttccggattttgatatggatgatgactactctattcctacttcttct
ggtcttaccagacctaagaaatctgcaatggcggaagagggaatcatggaactactatgg
caaaacggtcaagtagttatgcagagtcaaaatcaaagatctctgaagaaaagtactcac
ataggcaacggcgttggaggtggtgatgcggttattccttccgatggaagagagatccga
catgtagaggaaactactactactactccagtacaacatctatttatgcaggaagatgag
atggcttcatggctacactatgatgattctccctttgaacgtgatctctacgctgatctc
ctttattctaccccgagttccactgtaaccgctgctgcgccgccgcagcagcagatccgt
cctcctcctcctccaccgccagcagcaccaatcgcaacggctgctcctcggccgcctata
cctccttctagaaggttccagaactttggacacttctctagattgcctaggacaaggtta
gaacctgcaaattcgagcaaaagagatgcaacggtagcggattcaaatgaaactccgatt
acagtagggcaggaatctagagtttcacatatagccgataatgtagtaccagctcccgcc
gggaatgtaactgcgactacatcaactgcaattagggaaccggtgccgacatgtgaggtt
tcggtgacgtcatcaccaggtggctcgggaaatagtgtaagtggaagtgctgaaccacca
ccgccaccagggccgccgcataaggcggcagatatggcggcggcaggggatgatcggaaa
cgtaaaggaagagaaacggataacggggaaggaggtcagaatgaggatgctgaatttgag
tctcctgatacaaaaaagcaagcgcgtggttcaacatctacaaagcgatctcgtgctgca
gaggtccataatctttcagaaaggagacgtagagacagaataaatgagaagatgagggct
ctgcaggaactcataccgcgctgtaacaagacagacaaagcttcaatgctagatgaggca
attgagtatttgaaatcactgcaattgcaagtacagatgatgtccatggggtgcggcatg
gtcccaatgatgtatcctggaatgcagcagtacatgccgcctatgggaatgggcatgggt
atggggatgggtatggagatgggcatgaacaggccaatggtgccatatccacctctatta
ccaggtgcagcgatgcagaatgcagctgcagcagcacaaatggggcctagatttgctatg
ccgccatttcatttgccaccagttccagtaccagatccatcaagaatgcaagcttcaagt
cagccagatccaatgctaaatccacttgtcgcacataatccgaaccagcctagacttccg
aattttaatgatccatatcagcagttttttggtcttcaccaggcgcaaatcgcattacag
cagaatcaggcagtagaacagcccagtaacaataaatccagcagcagcaaagaagttgga
aacccagggaatcatcaatctggttga
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