Lycium barbarum (goji berry): 132610516
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Entry
132610516 CDS
T09483
Name
(RefSeq) ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132610516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132610516
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132610516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
AAA_15
NACHT
AAA_28
AAA_23
AAA
AAA_7
SMC_N
AAA_22
AAA_18
SRP54
AAA_24
AAA_25
AAA_5
AAA_30
PduV-EutP
AAA_16
AAA_14
AAA_33
Zeta_toxin
DUF3584
FtsK_SpoIIIE
AAA_13
Arf
Motif
Other DBs
NCBI-GeneID:
132610516
NCBI-ProteinID:
XP_060180820
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All DBs
Position
9:complement(24741772..24745715)
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AA seq
286 aa
AA seq
DB search
MEGKSSSIQVNGMQFSYDFQSPIFFDFNLNISPGSRCLLVGANGSGKTTLLRILAGKHMV
GGKDVVKVLNFSAFHDTHLVCSGDLAYLGESWSKNVGAVGDIPLQGDFSAEHMIFGVEGV
DPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARMD
LLDFFKEECELRGATIVYATHIFDGLETWATDLVYIQDGTLKRSEKLPELPELKSSPNLL
SVVENWLRSETTIEKKKPVVTPPRVQKSSPFGSSPFQSSRHMAYFR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaaatcaagcagtattcaagtaaatggaatgcaattctcatacgatttccaa
agtcccatctttttcgattttaatctcaacatttctcccggatctcgatgtctccttgtc
ggtgctaatggatccgggaagacgactctgttgaggatattggcgggaaagcatatggtt
ggtggaaaagatgtagtgaaggtgctgaatttttcggcttttcatgacacccaccttgtt
tgtagtggtgatctggcttaccttggagagtcttggagcaaaaatgttggagctgttgga
gatattccacttcagggagatttttcagctgaacatatgatattcggagttgaaggagtg
gatccagttcggagagaaaagttgattgagttgctggatattgatctgcaatggcgtatg
cacaaggtatcggatggtcagaggcgtagagtccaaatctgcatgggtctccttcacccc
tacaaggttcttttactggatgaggtcacagttgacttagatgtcgtcgcgaggatggat
ttattggatttcttcaaggaagaatgtgaactgagaggagctacaattgtctatgcaaca
catatatttgatgggctggaaacatgggcgacagatcttgtttacatccaagatggaact
ctgaagaggtctgagaagttacccgagcttccagagttgaagtcttcccccaatttgctt
tcagtagttgagaactggttgcggtctgagaccacgatagagaaaaagaagccagttgtc
actccaccaagggttcaaaaatcctctccttttggctcttctccatttcagtcatctaga
catatggcatattttcgctga
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