Lycium barbarum (goji berry): 132616093
Help
Entry
132616093 CDS
T09483
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132616093
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132616093
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132616093
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
132616093
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132616093
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132616093
Prokaryotic type
Other AARSs
132616093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
132616093
NCBI-ProteinID:
XP_060186666
LinkDB
All DBs
Position
10:1370592..1386915
Genome browser
AA seq
1182 aa
AA seq
DB search
MEDVCEGKDFSFPNQEETILKRWEQVKAFETQLKKTENQPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLGIKTKQQVFDMGIDKYNEE
CRAIVTRYVGEWEKTVVRMGRWIDFKNGYKTMDLGFMESVWWVFAQLFQKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMASFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIYVVAESRLAELPVEKAKKVTPDGPAAATQVPNSKTKPSGGKSQ
NVETYEVVDKFPGSSLVGKKYIPLFDYFKDFSDSAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCIENRIINKGESLIVAVDENGCFTDRITDFRNKYVKEADNDITQALKDKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFVMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWVSEDGEEIVVMDSIDKLEKLSGAKVTDLHRHNIDHITIP
SSRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEVDGFEPFIPTDQKTLQ
SSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEEDCRIALSTLYHVLLTACKAMAPLTPFFTEVLYQNLRKACDGSEESIHYCSYPEVEGK
RWERIEQSVSRMMTLIDLARNIRERHNKPLKTPLREMVVVHPDSEFLDDITGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSTEDIIAFEKAGEI
TIASHTLKLTDIKIVRGFKRPDNRKEDEMDAAGDGDVLVILDLRTDDSLFVAGLAREVVN
RIQKLRKKAALEPTDMVEVFFKSLDDDKKVSEQILESQESYIKDAIGSPLLPAEKIPSHA
ITIDEESFHGISGLSFVITLARPSLAFNSDAIAALYGGNTQYSQGLQTYLLMRDHHKLKS
EFQQGKGKIRVKCIENQPPVEVVLGKHVFLSVGDHFLNCKSQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtatgtgaaggcaaagatttctcattcccaaatcaagaagaaacaatcctt
aaaaggtgggaacaagttaaagccttcgaaacacagctcaaaaaaactgaaaaccaaccc
gaatacattttctacgatgggccaccatttgcaacaggtttaccacattatggccatata
ttagctggtacaattaaagatattgtgacccgatatcaatcaatgacgggtcatcatgtg
acccgaagatttggttgggattgtcatggattaccagttgaacatgagattgatgagaaa
cttgggattaaaactaaacaacaagtgtttgatatgggtattgataagtataatgaggaa
tgtagagctattgttactaggtatgttggtgaatgggagaagactgttgtgagaatgggg
agatggattgattttaagaatgggtataaaactatggatttggggtttatggaaagtgtt
tggtgggtttttgctcagttgtttcaaaaaggtcttgtttatagaggcttcaaggttatg
ccttatagtactggtttgaagactccattatccaattttgaagctaattctaattacaag
gaagtaagtgaccctgaaatcatggcttccttccctatagttgatgatcctgagggtgca
tcctttgttgcttggactacaactccttggacccttccaagtaatcttgctctttgtgtc
aacgccaattttgtatacgtcaaggttcgcaataaattcaacgggaaaatttatgtggtg
gcagaatctcgattggccgagctaccagttgagaaggcgaaaaaggtcaccccagatgga
cctgctgctgccactcaagttccaaattctaagacaaagccttctggtggtaaatcacag
aatgtggaaacttatgaggtggtggataaattccctgggtcgtcccttgtggggaagaag
tatattccactatttgattacttcaaggatttttccgactcagcatttagagtcgtcgca
gatgattatgtgacttctgatagtggtactggaattgttcattgcgctcctgcctttggt
gaggacgattatcgtgtttgtattgaaaaccgcataatcaataagggggagagcctgatt
gtggcagtagatgaaaatggctgctttactgatagaattactgacttcagaaataaatat
gttaaggaggcagataatgatatcactcaagcattgaaggataaaggaaggcttgtcaaa
tctggaaaatttatgcattcttaccctttctgctggagatctgacacacctctgatttac
agagcagttcctagctggtttgtcatggtggaaaagattaaggatcaattgctagagaac
aataagcaaacttactgggttcctgattttgtgaaggaaaaacgcttccacaattggtta
gaaaatgcaagagactgggctgttagccggagtaggttctggggtactcctcttcctgtg
tgggttagtgaggatggtgaggagatagttgttatggactccattgacaaactggaaaag
ctctctggtgctaaggtgacggacttgcatcgtcacaacattgatcacattaccatccca
tcgagtcgggggcctgaatttggcgttcttcgacgtgtggaggatgtatttgattgctgg
tttgagagtggctcaatgccttatgcttatatccactatccttttgagaatgttgaactc
ttcgagaacaatttcccgggtcattttgtggcagaaggtctcgatcaaactcgtggatgg
ttctacacccttatggtcctttctactgccctttttgggaaacctgcttttagaaacctc
atttgtaatggtcttgtcctggctgaggatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattgcgtttatacctg
ataaactctcccgttgtccgtgctgaacctctgcgattcaagaaagaaggagtttttgct
gtggtgaaagatgttttcttgccatggtacaatgcatataggttccttgttcagaatgca
aagaggcttgaggttgatgggtttgaaccattcattcctaccgaccagaaaactttgcag
agttcttcgaatgtcctggaccaatggataaattctgcaactcagagcttagtgcatttt
gtccggcaggaaatggatgcttatagattgtacacggtggttccgtatctcctaaaattt
cttgataatttaactaatatctatgtgcggttcaatcggaaaaggctaaaaggccgtact
ggtgaggaagactgcagaattgctctttcaactctttaccatgtgcttctgactgcatgt
aaagctatggcaccattaactccttttttcactgaggttctgtaccaaaatttgcggaaa
gcttgcgatggatcagaggagagcattcactattgcagctatcctgaagtggaagggaag
aggtgggagcgcattgagcagagtgttagtaggatgatgacacttattgaccttgcacga
aatattcgtgagcgtcacaacaaacctcttaaaactccgctcagggaaatggtggttgta
catccagattcagaattccttgatgacatcacgggcaaactaagagagtatgtgctcgag
gagctaaacattaaatctttggtcccatgcaatgacacattgaagtatgcttctttgcgt
gcagagccagatttcagtgtgttaggaaaaaggctgggaaagtcgatgggagttgttgcc
aaggaggttaaggccatgtcaacagaagatattattgcttttgagaaagcgggagaaatt
actattgcttcacacactttgaagcttactgatatcaagattgttcggggtttcaagcgt
cctgataataggaaagaggatgaaatggacgcggcaggggacggtgatgttttagtgata
ctggatttgcgtactgatgattcactctttgtggctggactggctcgggaggttgtgaat
aggatccagaaactgagaaagaaagccgctcttgaacccacggacatggtagaggtcttc
ttcaagtctttggatgatgataaaaaagtctctgagcagattttggagtctcaggaatca
tatattaaagacgccattggatctcctttgctgcctgctgaaaaaatcccatcacatgcc
ataactattgatgaagagagttttcatggaatctctggcttgtcctttgtgatcacgtta
gcaagaccaagtctagcgtttaattcagatgccattgctgctctatatggaggaaacaca
cagtattctcaaggcttacaaacttacttgctgatgagggatcatcataaattgaaatca
gagtttcaacaaggaaagggcaagataagggtcaagtgcattgagaaccagcctccagtt
gaggtggtactgggaaaacatgtcttcttgagtgttggagatcatttcttgaactgcaaa
tcacagtga
DBGET
integrated database retrieval system
