Lycium barbarum (goji berry): 132618966
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Entry
132618966 CDS
T09483
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132618966
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
132618966
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4_4
zf-Nse
zf-RING_Vps41
Siva
Motif
Other DBs
NCBI-GeneID:
132618966
NCBI-ProteinID:
XP_060189935
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Position
11:19815934..19825090
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AA seq
818 aa
AA seq
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MNAVLDKERDYHYLELMARIGGRKKDRAKKQEERPELMWEKWEEQNDSWLEENYRDHDLD
LDDRNELIYETVEPSSDMIVPLFRYQKEWLFWALNQEESEAKGGILADEMGMGKTIQAIA
LVLAKRELQKVSSIYSSSPSTSQKLPVLKGTLIICPVVAVQQWLNEINRCTIEGSNRILV
YHGSNRRKLNHNIEEYDFVITTYSIVEAEYRKNVMPPKQKCEWCGRSYYEEKLSMHLKRF
CGPDAPKNQGKKLKLDVELLKQKTDTTELETNMQTTDSMASETNVQKSGSTESMTDMKKT
GRRKHRRMTEERKNDGSIDNSASTSQDLSHRKSILHSVKWDRIILDEAHYVKDRRSNTTK
ATLSLESSFKWALSGTPIQNLVGDLYSLVRFLQIVPYSFYFCKDCDCRTLDHSSTTECPQ
CPHTSNRHFCWWNRYITTPMTHEGSSGNGRDAMVLLKHKILNCILLRRSKKARAADLALP
QKIVTLRKDSLDVKEEDYYMSLYNKGQAQFNTYVQAGTLMNNFAHIFEILTRLRQAVDHP
YLVVYSSTALAKSGNLDSGNVDQPCGLCHETVDDPVVTSCMHVFCKTCLMDFAASVGQVP
CPLCSELLTVDFTANNDNGQNSKPTLKGFKSSSILNRMQLDAFQSSTKIDALREEIRFMI
ERDGSAKGIVFSQFTSFLDLIHYSLQKSGINCVQLVGSMSIDARAAAITTFTADPDCRIL
LMSLKAGSVALNLTVASQVFMMDPWWNPAVERQAQDRIHRIGQYKPVRIVRFVIENTIEE
KILKLQEKKDLVFEGTIGGSSEAFGKLTEADLKFLFAT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgttcttgataaagagagagactatcactatctcgaattgatggcacggata
ggaggaaggaaaaaagaccgtgcgaagaaacaagaggaaagaccagagttaatgtgggag
aaatgggaagaacaaaacgatagttggcttgaggaaaactacagagatcatgatttggat
ttggatgatcggaacgagttaatttatgaaacagtagaaccatcatcggatatgattgtg
ccattgttcaggtaccagaaggagtggttgttttgggcacttaatcaagaagaatctgaa
gccaaagggggtattctcgctgacgagatgggaatgggtaagaccatacaagcgatagcg
cttgttcttgccaaacgtgaattacagaaagtttccagtatatattcgtcttcacccagt
acttcccagaaactcccagtactaaaggggactcttattatatgtccggtggttgctgtc
cagcagtggctcaatgagataaatcgatgcaccattgaaggaagcaacagaattcttgtt
tatcatggttccaacagaaggaagcttaaccacaatattgaagaatatgattttgtcatc
actacgtactccattgtcgaggctgaatataggaaaaacgtgatgcctccaaaacaaaag
tgcgaatggtgtggcagatcatattatgaagagaagttgtccatgcacctgaagaggttt
tgtggaccagatgcgccaaagaatcaggggaagaagttaaaacttgatgtagaattgttg
aagcagaaaacagatactacggagttagagacaaatatgcagacgacagactctatggcg
tcagagactaatgtgcagaaatcaggttctactgagtcaatgactgatatgaagaaaaca
ggtcgtaggaagcataggagaatgacagaagaacggaaaaatgatggttctattgataat
tcagccagtacaagtcaagatttgtcacacaggaagtcaattttgcattcagtaaagtgg
gatcgtatcatcttggatgaggctcattatgtaaaagataggcgcagcaacacgacaaaa
gctactctaagtttggaatcttcttttaagtgggccttaagtggtactccgattcagaat
cttgtcggagacttgtattcacttgtccgtttcctacaaatagtaccctactctttttac
ttttgcaaggattgtgattgcagaacacttgaccatagctctacaaccgagtgcccacag
tgccctcacacatctaaccggcacttttgctggtggaatagatacattactacacctatg
acacatgaagggagttctgggaatggtcgagatgcaatggttcttttgaagcacaaaatt
ctaaattgtatcctattaagacgtagcaaaaaagcaagagctgctgatcttgcacttcct
caaaagattgttactttgagaaaagattctttggatgtcaaagaagaagactactacatg
tcattgtacaataaaggccaggcacaatttaatacttatgttcaagctggaacattgatg
aataactttgcacacatttttgagattctcacgcgcctacggcaggcagttgatcatcct
taccttgtggtatactcgagtactgctttggctaaaagtgggaacctagactctggaaat
gttgatcaaccttgtggcttatgtcatgagacagtggatgatccagttgttacttcttgc
atgcatgtattttgcaaaacgtgtttgatggactttgctgcaagtgttggacaagtgcca
tgccctttgtgttctgaactacttacagttgacttcactgcaaataatgataatggtcag
aattctaaaccgactctcaaagggtttaagtcctcaagtatactgaacagaatgcagctc
gatgcattccagtccagcactaaaatagatgcattgcgggaagaaattaggttcatgatt
gaaagagatggttctgcaaaaggaattgttttcagccagttcacatcttttttggatctg
atacactattctcttcagaagtcgggcatcaattgtgttcaattagttggatccatgtct
attgatgcaagagctgcagccattaccacatttactgcggatccagattgcaggatattg
cttatgagcttgaaagctggaagtgttgcactcaatcttacagttgcatcacaggttttc
atgatggatccttggtggaatcctgctgtggagcgacaagcccaagatagaatccatcga
atagggcaatataaacctgtcaggattgtgagatttgtgattgaaaatacaattgaagag
aagatcttaaagctgcaggagaagaaggaccttgtttttgaagggacaattggtggctct
tcagaggcgtttggaaagctgacagaagcagacttaaaattcttgtttgcaacttaa
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