KEGG   Lycium barbarum (goji berry): 132618966
Entry
132618966         CDS       T09483                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132618966
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      132618966
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_2 Prok-RING_4 zf-C3HC4_4 zf-Nse zf-RING_Vps41 Siva
Other DBs
NCBI-GeneID: 132618966
NCBI-ProteinID: XP_060189935
LinkDB
Position
11:19815934..19825090
AA seq 818 aa
MNAVLDKERDYHYLELMARIGGRKKDRAKKQEERPELMWEKWEEQNDSWLEENYRDHDLD
LDDRNELIYETVEPSSDMIVPLFRYQKEWLFWALNQEESEAKGGILADEMGMGKTIQAIA
LVLAKRELQKVSSIYSSSPSTSQKLPVLKGTLIICPVVAVQQWLNEINRCTIEGSNRILV
YHGSNRRKLNHNIEEYDFVITTYSIVEAEYRKNVMPPKQKCEWCGRSYYEEKLSMHLKRF
CGPDAPKNQGKKLKLDVELLKQKTDTTELETNMQTTDSMASETNVQKSGSTESMTDMKKT
GRRKHRRMTEERKNDGSIDNSASTSQDLSHRKSILHSVKWDRIILDEAHYVKDRRSNTTK
ATLSLESSFKWALSGTPIQNLVGDLYSLVRFLQIVPYSFYFCKDCDCRTLDHSSTTECPQ
CPHTSNRHFCWWNRYITTPMTHEGSSGNGRDAMVLLKHKILNCILLRRSKKARAADLALP
QKIVTLRKDSLDVKEEDYYMSLYNKGQAQFNTYVQAGTLMNNFAHIFEILTRLRQAVDHP
YLVVYSSTALAKSGNLDSGNVDQPCGLCHETVDDPVVTSCMHVFCKTCLMDFAASVGQVP
CPLCSELLTVDFTANNDNGQNSKPTLKGFKSSSILNRMQLDAFQSSTKIDALREEIRFMI
ERDGSAKGIVFSQFTSFLDLIHYSLQKSGINCVQLVGSMSIDARAAAITTFTADPDCRIL
LMSLKAGSVALNLTVASQVFMMDPWWNPAVERQAQDRIHRIGQYKPVRIVRFVIENTIEE
KILKLQEKKDLVFEGTIGGSSEAFGKLTEADLKFLFAT
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgaatgctgttcttgataaagagagagactatcactatctcgaattgatggcacggata
ggaggaaggaaaaaagaccgtgcgaagaaacaagaggaaagaccagagttaatgtgggag
aaatgggaagaacaaaacgatagttggcttgaggaaaactacagagatcatgatttggat
ttggatgatcggaacgagttaatttatgaaacagtagaaccatcatcggatatgattgtg
ccattgttcaggtaccagaaggagtggttgttttgggcacttaatcaagaagaatctgaa
gccaaagggggtattctcgctgacgagatgggaatgggtaagaccatacaagcgatagcg
cttgttcttgccaaacgtgaattacagaaagtttccagtatatattcgtcttcacccagt
acttcccagaaactcccagtactaaaggggactcttattatatgtccggtggttgctgtc
cagcagtggctcaatgagataaatcgatgcaccattgaaggaagcaacagaattcttgtt
tatcatggttccaacagaaggaagcttaaccacaatattgaagaatatgattttgtcatc
actacgtactccattgtcgaggctgaatataggaaaaacgtgatgcctccaaaacaaaag
tgcgaatggtgtggcagatcatattatgaagagaagttgtccatgcacctgaagaggttt
tgtggaccagatgcgccaaagaatcaggggaagaagttaaaacttgatgtagaattgttg
aagcagaaaacagatactacggagttagagacaaatatgcagacgacagactctatggcg
tcagagactaatgtgcagaaatcaggttctactgagtcaatgactgatatgaagaaaaca
ggtcgtaggaagcataggagaatgacagaagaacggaaaaatgatggttctattgataat
tcagccagtacaagtcaagatttgtcacacaggaagtcaattttgcattcagtaaagtgg
gatcgtatcatcttggatgaggctcattatgtaaaagataggcgcagcaacacgacaaaa
gctactctaagtttggaatcttcttttaagtgggccttaagtggtactccgattcagaat
cttgtcggagacttgtattcacttgtccgtttcctacaaatagtaccctactctttttac
ttttgcaaggattgtgattgcagaacacttgaccatagctctacaaccgagtgcccacag
tgccctcacacatctaaccggcacttttgctggtggaatagatacattactacacctatg
acacatgaagggagttctgggaatggtcgagatgcaatggttcttttgaagcacaaaatt
ctaaattgtatcctattaagacgtagcaaaaaagcaagagctgctgatcttgcacttcct
caaaagattgttactttgagaaaagattctttggatgtcaaagaagaagactactacatg
tcattgtacaataaaggccaggcacaatttaatacttatgttcaagctggaacattgatg
aataactttgcacacatttttgagattctcacgcgcctacggcaggcagttgatcatcct
taccttgtggtatactcgagtactgctttggctaaaagtgggaacctagactctggaaat
gttgatcaaccttgtggcttatgtcatgagacagtggatgatccagttgttacttcttgc
atgcatgtattttgcaaaacgtgtttgatggactttgctgcaagtgttggacaagtgcca
tgccctttgtgttctgaactacttacagttgacttcactgcaaataatgataatggtcag
aattctaaaccgactctcaaagggtttaagtcctcaagtatactgaacagaatgcagctc
gatgcattccagtccagcactaaaatagatgcattgcgggaagaaattaggttcatgatt
gaaagagatggttctgcaaaaggaattgttttcagccagttcacatcttttttggatctg
atacactattctcttcagaagtcgggcatcaattgtgttcaattagttggatccatgtct
attgatgcaagagctgcagccattaccacatttactgcggatccagattgcaggatattg
cttatgagcttgaaagctggaagtgttgcactcaatcttacagttgcatcacaggttttc
atgatggatccttggtggaatcctgctgtggagcgacaagcccaagatagaatccatcga
atagggcaatataaacctgtcaggattgtgagatttgtgattgaaaatacaattgaagag
aagatcttaaagctgcaggagaagaaggaccttgtttttgaagggacaattggtggctct
tcagaggcgtttggaaagctgacagaagcagacttaaaattcttgtttgcaacttaa

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