KEGG   Lycium barbarum (goji berry): 132640573
Entry
132640573         CDS       T09483                                 
Name
(RefSeq) DNA repair protein RAD16 isoform X1
  KO
K15083  DNA repair protein RAD16
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132640573
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      132640573
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 DEAD zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_2
Other DBs
NCBI-GeneID: 132640573
NCBI-ProteinID: XP_060213186
LinkDB
Position
5:complement(16658768..16670553)
AA seq 909 aa
MKLRSRPSSSSTKVGESSRQYQDSSDEDDVLAMSLDSDDYGSSDEDEVINLLNEGQTSGV
LDSDYVTEEVWSEITKRRKLGSYRKKGQKSIKIKEEQVEEEEHADWMNEVGGGGEVDTGY
RLLMGRIEDRKKNRDKSKKKRGATLMWEIWEEENDRWMAENYTNDLDLNGQNELVTETVE
PPSDLIMPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVLAQRELGQAIS
DSRLLSPAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNI
DKFAEYDFVITTYSTVEAEYRKNVMPPKQKCQWCGKPFYEQKLSVHQKYFCGPDAVKTAN
QSKQQSKKSKPVGKTSKLKKDYSDSEIDMGKRGRGKVKERKSETDAGSIDDSASVGQDMS
TKKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLV
RFLQMIPYSYYFCKDCDCRVLDYSSSECPHCPHKSVRHFCWWNRYIASPIQAQGNHRTGR
DAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQF
NTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARNGHINDAGYVEQPCGLCH
DPVEDPVVTSCTHVFCKSCLISFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKATIKGF
RSSSILNRICLDDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQKSG
ISCVQLDGSMTMAARDNAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPA
VERQAQDRIHRIGQYKPIRVVRFVIENTIEERILKLQEKKELVFEGTVGGCSEALGKLTE
ADLKFLFVT
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaagctccgttctcgtccttcatcctcttcaactaaagtaggagaatcaagccgccaa
tatcaggacagttctgatgaggatgatgttcttgctatgtctttggattctgatgactat
ggaagcagtgatgaagatgaagtaattaatttgttgaacgaaggccaaactagtggagtt
cttgatagtgattatgtaacagaggaagtttggtccgagataacaaaaagaaggaaattg
ggatcctatagaaaaaagggccaaaagagtatcaaaataaaagaagagcaggtagaagaa
gaggagcacgcagattggatgaatgaagtaggagggggtggtgaagtagatactggctat
cgtctattgatggggaggatagaggataggaagaagaaccgtgacaagagtaaaaagaag
agaggagccactttgatgtgggagatctgggaagaagagaacgataggtggatggctgaa
aactatacaaatgatctagacttgaatggtcagaacgagttggtgactgaaactgttgag
ccaccatctgacttgatcatgcccttgctgaggtaccagaaagagtggttggcttgggca
ttgaagcaagaagaatctaccgctagaggcggtattcttgctgatgaaatggggatggga
aagactgttcaagccatagctcttgtgcttgctcaacgcgaattagggcaagcaatttct
gattcccgtttgctttcacctgccccttgtacttcccaggagctcccagcagtgaaagga
acccttgttatatgtcctgttgttgctgtgattcagtgggtcagtgagattgaccgcttc
accactaaaggaagcaacaaaattcttgtttatcatggtgccaacagggagaaaaatatt
gacaaattcgcggaatatgattttgttatcactacatactccacagtggaggctgagtat
aggaaaaatgtgatgccaccaaaacaaaaatgccagtggtgtggaaaacctttttacgaa
caaaagttgtctgttcaccagaagtacttttgtggaccagatgctgttaaaactgctaac
caatcaaagcagcagagcaagaagtcaaagccagtaggaaaaacctcaaagctgaaaaaa
gactacagtgattcagaaattgatatgggcaaaagaggtcgtgggaaggtaaaggagcgc
aagagcgagactgatgctggttctattgatgattcagccagtgtcggtcaagatatgtcc
acgaagaagtcaattttgcactctgtgaaatggaatcgtatcattttggatgaggcccat
tatgtgaaagatagacgctccaacactacaagagctattcttgcgctagaatcttcttat
aagtgggccttaagtggtactcccctccagaaccgtgtaggagagttgtactcacttgtc
cgtttcctgcaaatgattccttactcttactacttctgcaaagattgtgattgcagagtt
ctggactatagctcatccgagtgcccacattgcccccacaaatctgttcggcatttttgc
tggtggaatagatatattgcctcacccatacaagctcaagggaatcacaggactggtaga
gatgcgatggttttgttgaaacacaaaattttgaaaagcatattgctaagacgtactaaa
aagggaagggctgctgatcttgcacttcctccgaggattgttaccttgcgcaaagattct
ttggatgtgaaagaagaagactactacacatcactatacaatgaaagccaggcacagttt
aatacatacattcaagctggtactttgatgaataactatgctcacatttttgatctactc
actcgcctgcgacaggcagttgatcatccttatcttgtggtatactcaagtactgctttg
gctagaaatggacacataaatgatgcaggctatgttgaacaaccatgtggtttatgccat
gatccagtagaagatccagttgttacttcttgcacacatgtcttttgcaagtcatgtctg
ataagtttttctgcaagtgtgggacaagtttcatgcccttcatgttctaaaccacttaca
gtggatttcaccgcaaatgataagggggatcagaaatctaaagcgactatcaaagggttt
aggtcttcaagtatactgaacagaatttgtcttgatgatttccagacaagcacaaaaata
gatgctttgagagaagaaataaggttcatggttgaaagagatggttctgcaaaagcaata
gtcttcagccaattcacatcgtttttggatctgatacactattctttacagaagtcgggc
atcagttgtgttcagttagatggatccatgactatggctgcaagagataatgcaattaca
agatttactgaggatccagattgcaggatattccttatgagcttgaaagccggtggtgtt
gccctcaatcttacagtggcatcacatgttttcttgatggatccttggtggaatcctgct
gtggagcggcaagcccaagatagaatccatcgaatagggcagtataaaccaatcagggtt
gtgagatttgtgattgagaataccattgaggagaggatcttaaagttgcaagagaagaag
gaactagtttttgaagggacggtcggtggctgttctgaggccttggggaaactaacagag
gcagacttgaaattcttgtttgtaacctaa

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