Entry |
|
Name |
(RefSeq) DNA repair protein RAD16 isoform X1
|
KO |
K15083 | DNA repair protein RAD16 |
|
Organism |
lbb Lycium barbarum (goji berry)
|
Brite |
KEGG Orthology (KO) [BR:lbb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lbb03400]
132640573
DNA repair and recombination proteins [BR:lbb03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
132640573
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:complement(16658768..16670553)
|
AA seq |
909 aa
MKLRSRPSSSSTKVGESSRQYQDSSDEDDVLAMSLDSDDYGSSDEDEVINLLNEGQTSGV
LDSDYVTEEVWSEITKRRKLGSYRKKGQKSIKIKEEQVEEEEHADWMNEVGGGGEVDTGY
RLLMGRIEDRKKNRDKSKKKRGATLMWEIWEEENDRWMAENYTNDLDLNGQNELVTETVE
PPSDLIMPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVLAQRELGQAIS
DSRLLSPAPCTSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNI
DKFAEYDFVITTYSTVEAEYRKNVMPPKQKCQWCGKPFYEQKLSVHQKYFCGPDAVKTAN
QSKQQSKKSKPVGKTSKLKKDYSDSEIDMGKRGRGKVKERKSETDAGSIDDSASVGQDMS
TKKSILHSVKWNRIILDEAHYVKDRRSNTTRAILALESSYKWALSGTPLQNRVGELYSLV
RFLQMIPYSYYFCKDCDCRVLDYSSSECPHCPHKSVRHFCWWNRYIASPIQAQGNHRTGR
DAMVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQF
NTYIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARNGHINDAGYVEQPCGLCH
DPVEDPVVTSCTHVFCKSCLISFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKATIKGF
RSSSILNRICLDDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQKSG
ISCVQLDGSMTMAARDNAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPA
VERQAQDRIHRIGQYKPIRVVRFVIENTIEERILKLQEKKELVFEGTVGGCSEALGKLTE
ADLKFLFVT |
NT seq |
2730 nt +upstreamnt +downstreamnt
atgaagctccgttctcgtccttcatcctcttcaactaaagtaggagaatcaagccgccaa
tatcaggacagttctgatgaggatgatgttcttgctatgtctttggattctgatgactat
ggaagcagtgatgaagatgaagtaattaatttgttgaacgaaggccaaactagtggagtt
cttgatagtgattatgtaacagaggaagtttggtccgagataacaaaaagaaggaaattg
ggatcctatagaaaaaagggccaaaagagtatcaaaataaaagaagagcaggtagaagaa
gaggagcacgcagattggatgaatgaagtaggagggggtggtgaagtagatactggctat
cgtctattgatggggaggatagaggataggaagaagaaccgtgacaagagtaaaaagaag
agaggagccactttgatgtgggagatctgggaagaagagaacgataggtggatggctgaa
aactatacaaatgatctagacttgaatggtcagaacgagttggtgactgaaactgttgag
ccaccatctgacttgatcatgcccttgctgaggtaccagaaagagtggttggcttgggca
ttgaagcaagaagaatctaccgctagaggcggtattcttgctgatgaaatggggatggga
aagactgttcaagccatagctcttgtgcttgctcaacgcgaattagggcaagcaatttct
gattcccgtttgctttcacctgccccttgtacttcccaggagctcccagcagtgaaagga
acccttgttatatgtcctgttgttgctgtgattcagtgggtcagtgagattgaccgcttc
accactaaaggaagcaacaaaattcttgtttatcatggtgccaacagggagaaaaatatt
gacaaattcgcggaatatgattttgttatcactacatactccacagtggaggctgagtat
aggaaaaatgtgatgccaccaaaacaaaaatgccagtggtgtggaaaacctttttacgaa
caaaagttgtctgttcaccagaagtacttttgtggaccagatgctgttaaaactgctaac
caatcaaagcagcagagcaagaagtcaaagccagtaggaaaaacctcaaagctgaaaaaa
gactacagtgattcagaaattgatatgggcaaaagaggtcgtgggaaggtaaaggagcgc
aagagcgagactgatgctggttctattgatgattcagccagtgtcggtcaagatatgtcc
acgaagaagtcaattttgcactctgtgaaatggaatcgtatcattttggatgaggcccat
tatgtgaaagatagacgctccaacactacaagagctattcttgcgctagaatcttcttat
aagtgggccttaagtggtactcccctccagaaccgtgtaggagagttgtactcacttgtc
cgtttcctgcaaatgattccttactcttactacttctgcaaagattgtgattgcagagtt
ctggactatagctcatccgagtgcccacattgcccccacaaatctgttcggcatttttgc
tggtggaatagatatattgcctcacccatacaagctcaagggaatcacaggactggtaga
gatgcgatggttttgttgaaacacaaaattttgaaaagcatattgctaagacgtactaaa
aagggaagggctgctgatcttgcacttcctccgaggattgttaccttgcgcaaagattct
ttggatgtgaaagaagaagactactacacatcactatacaatgaaagccaggcacagttt
aatacatacattcaagctggtactttgatgaataactatgctcacatttttgatctactc
actcgcctgcgacaggcagttgatcatccttatcttgtggtatactcaagtactgctttg
gctagaaatggacacataaatgatgcaggctatgttgaacaaccatgtggtttatgccat
gatccagtagaagatccagttgttacttcttgcacacatgtcttttgcaagtcatgtctg
ataagtttttctgcaagtgtgggacaagtttcatgcccttcatgttctaaaccacttaca
gtggatttcaccgcaaatgataagggggatcagaaatctaaagcgactatcaaagggttt
aggtcttcaagtatactgaacagaatttgtcttgatgatttccagacaagcacaaaaata
gatgctttgagagaagaaataaggttcatggttgaaagagatggttctgcaaaagcaata
gtcttcagccaattcacatcgtttttggatctgatacactattctttacagaagtcgggc
atcagttgtgttcagttagatggatccatgactatggctgcaagagataatgcaattaca
agatttactgaggatccagattgcaggatattccttatgagcttgaaagccggtggtgtt
gccctcaatcttacagtggcatcacatgttttcttgatggatccttggtggaatcctgct
gtggagcggcaagcccaagatagaatccatcgaatagggcagtataaaccaatcagggtt
gtgagatttgtgattgagaataccattgaggagaggatcttaaagttgcaagagaagaag
gaactagtttttgaagggacggtcggtggctgttctgaggccttggggaaactaacagag
gcagacttgaaattcttgtttgtaacctaa |