KEGG   Lycium barbarum (goji berry): 132640849
Entry
132640849         CDS       T09483                                 
Name
(RefSeq) protein SIEL isoform X1
  KO
K13141  integrator complex subunit 4
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132640849
Spliceosome [BR:lbb03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    132640849
SSDB
Motif
Pfam: HEAT PDS5 HEAT_2 HEAT_EZ Cnd1 Cnd3
Other DBs
NCBI-GeneID: 132640849
NCBI-ProteinID: XP_060213616
LinkDB
Position
5:55299485..55318275
AA seq 1026 aa
MEHLLRRNLETSENNSPQKALLQALSLISNPSTSNSTLSSISNTLILTLKTPNSNPFIHH
HILRLFSLLKNPNPNLTSALRQFSSSSTRSLADTLACSNISVNDEESTSVPSTASTRSRA
DELACSNVNANDESTLLPSTASASSLAGARAITNADDESTYVLSATTSTRSLADARACSN
ADDESVFVPSTTSTRSLADAFACLLSISDSNNVNVNDVSTFLSLVFKPCVSVRHWLLLNV
SRFEIRPSVLLTVLLGFTKDPYPDIRNVALIGLADLCKCVLVEDGGLIRGCYFRAVEFLF
DFEDSVRCSAVRAVSACGQLIVSSTQGRSKGGWSDALFLQLCSVVRDMSVEVRVEVFNAL
GKIEIVSEYILLQMLYKKASSATNKMDFPGQYSEKLFRIPATSASFAFLHGLEDDFVEVR
ESACRALRTLAILSAEFSKEVVNLLMDALNDDSVAVRLQALDTMHHMAMFGHLKVQQERL
HMFLWVLLDSHSLIRCTARKVLKLTELPSLDMFKMCVNGLIRDLELYPQDEAEVFSALFM
IGQNHGKFLVSLINEVSQMIEPSSGGKLGYDNVRKASYLVLATSAPVSLKQRTCSIPPRI
FSYAVTLLGRVSRSLADIVDQRTLLAYLSYCSRFTFVSASEFFKMEEQLEKGDVLLTQRR
EISKYHAGRKLQLKEAESSHLDFQIEHNKEINCVNIMLQVVIDIWPSLKLGLIDEVTQTR
RLSLKAELGTISNNNHRGGLVFALQYIDALERLGHLWSHLVFSKEFYFHEWGKLECSLNK
LDRCLRDMRYKLVGLTKEDNFLILELIIAHGILTLCNIETCANKTTLKKLHSVISCIEHI
CGEGSTESSNFLVEVQKSLSESNTSSCPILDNPYLLLKSLEYFTPRKVVTSRNLKYMEAE
LHCQGNEFQNPLPFISGLPVGVSLDITLHNISSENMLWIKMSLEEKLTQFVFLDLHETEG
HDELRKFTFVAPFYQTPKANYFSLKICIVLECMSDDERLCRSRGGPKHEVAHLCEEKEVY
FSVEVR
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggaacacctactccggcgtaatttggagaccagcgaaaacaacagtcctcaaaaagct
ctcttacaagctctttctctcatatccaacccttccacttccaactctacactttcatcc
atctccaataccctaatcctaaccctcaaaacccctaactctaacccttttatccaccat
cacattcttcgcctcttctctcttctcaaaaaccctaaccctaacctcacctccgccctc
cgtcaattctcttcatcctccacgcgctcactcgccgacaccctcgcgtgtagcaacatc
tctgttaatgatgaagaatcaacatccgtcccttcaacagcctccacgcgctcacgcgcc
gatgaactcgcgtgtagtaacgttaacgctaatgatgagtctaccttactcccttcaaca
gcctccgcgagctcactcgctggtgcacgcgcgattactaacgctgatgatgaatccaca
tatgtcctttctgcaacaacctccacgcgctcactagccgatgcacgcgcgtgtagtaac
gctgatgatgaatcagtattcgtcccttcaactacctccacgcgatcactagccgatgca
tttgcgtgtctcctctccatctccgatagtaacaacgttaacgtcaatgatgtgtcgaca
ttcctgtctcttgtttttaagccttgtgtttcggttcgtcattggttgcttttaaatgtg
agtagatttgagataaggccgtctgttttgcttacggtactgctagggtttacgaaggat
ccttatccggatattcgaaatgttgctttgattggattagctgatttgtgcaagtgtgtt
cttgtggaagatggaggtcttatacgaggttgctattttcgagctgttgagtttctgttt
gattttgaggactccgtacgatgttctgctgttcgtgcggttagtgcatgcgggcagttg
attgtgtcatctacacaagggagaagtaaagggggctggtctgatgcattatttctgcag
ctatgttcagtggtgagagacatgagtgttgaggtcagggttgaagtttttaatgcccta
gggaagattgaaattgtttctgaatatattcttttacaaatgctatataagaaagcttca
tctgcaacaaacaaaatggattttcctggccagtactctgagaaattgttcaggatacca
gcgacgagtgccagttttgcttttctacatggactggaggatgattttgttgaggtaaga
gaatctgcttgccgagctttgcgaacgttagcgatcctttctgctgagttttctaaagag
gttgtgaacttgttgatggacgcacttaatgatgattcggtggctgtaagattacaagct
ttagatacaatgcatcatatggcaatgtttggccatctaaaggtgcaacaagaacgtcta
cacatgtttctttgggttctactagacagtcacagcttgataagatgtacagcgaggaag
gtactaaaactgacggaactaccgagcttagatatgttcaaaatgtgtgttaatggactt
ataagagatttggaactgtatccccaggatgaagctgaagtcttttctgctttgttcatg
attggtcaaaaccacggaaagtttttagtcagcttgattaacgaagtttcccaaatgata
gagccctcttctggaggcaagttgggttatgacaatgtgaggaaagcttcatatctagtg
ttagccacctccgcaccagtctcattgaagcagcgaacttgcagtattccaccgcgaata
ttctcttatgctgtcacactattagggagagtctctcgcagtttggctgatatagttgac
cagagaacacttttggcttatctttcttattgcagtagattcacatttgtttctgcatca
gagttttttaaaatggaagagcagctggagaaaggtgatgttctattgacacaaagacgc
gaaatctctaaatatcacgctgggaggaaattacagctgaaggaagcagaaagctcgcat
ttagacttccagattgagcataataaagagataaattgtgtgaatatcatgcttcaggtg
gtaatagacatttggccatcactgaaacttgggttgatcgatgaagtcactcagacacgg
aggttgagtttgaaggcagaattaggaacgatatcaaataacaatcataggggtgggtta
gtgtttgctttgcagtatatagatgctttggaacgacttggacacttatggtcacacttg
gtgttctccaaggagttctactttcatgaatgggggaaattggagtgttctttgaacaaa
ctggacagatgcctgagggatatgagatataagttagtaggtttaaccaaggaggacaat
tttcttatcttagagttaataattgctcatggtatattgacactttgtaatattgaaacc
tgtgcgaacaagactactctaaagaagttacattctgtgatatcttgtattgaacatatt
tgtggagaaggatccactgaatcatccaattttctggttgaagttcagaagtcattgagt
gagagtaacacctctagttgtccaatcttggacaatccatatctccttctgaagtcactt
gagtattttactccaagaaaggtagttacgtcgaggaatctcaaatatatggaagctgaa
ctgcattgtcaaggcaatgaatttcaaaatcctcttccgttcatctctgggctgcctgtg
ggtgtatctttagatatcacactccataacatctcgagcgagaatatgttgtggataaaa
atgagtcttgaagagaaattaactcaatttgttttcctggatttgcatgagaccgaagga
cacgatgaactgaggaaattcacatttgttgcacccttctaccaaacccccaaggcaaac
tatttctcattgaagatctgtattgttctagagtgcatgtctgatgatgaacggttgtgc
aggagccgtggaggtcctaagcatgaagttgctcatctctgtgaagaaaaagaagtgtat
ttttccgtcgaagttaggtaa

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