Entry |
|
Name |
(RefSeq) protein SIEL isoform X1
|
KO |
K13141 | integrator complex subunit 4 |
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Organism |
lbb Lycium barbarum (goji berry)
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Brite |
KEGG Orthology (KO) [BR:lbb00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lbb03041]
132640849
Spliceosome [BR:lbb03041]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
132640849
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
5:55299485..55318275
|
AA seq |
1026 aa
MEHLLRRNLETSENNSPQKALLQALSLISNPSTSNSTLSSISNTLILTLKTPNSNPFIHH
HILRLFSLLKNPNPNLTSALRQFSSSSTRSLADTLACSNISVNDEESTSVPSTASTRSRA
DELACSNVNANDESTLLPSTASASSLAGARAITNADDESTYVLSATTSTRSLADARACSN
ADDESVFVPSTTSTRSLADAFACLLSISDSNNVNVNDVSTFLSLVFKPCVSVRHWLLLNV
SRFEIRPSVLLTVLLGFTKDPYPDIRNVALIGLADLCKCVLVEDGGLIRGCYFRAVEFLF
DFEDSVRCSAVRAVSACGQLIVSSTQGRSKGGWSDALFLQLCSVVRDMSVEVRVEVFNAL
GKIEIVSEYILLQMLYKKASSATNKMDFPGQYSEKLFRIPATSASFAFLHGLEDDFVEVR
ESACRALRTLAILSAEFSKEVVNLLMDALNDDSVAVRLQALDTMHHMAMFGHLKVQQERL
HMFLWVLLDSHSLIRCTARKVLKLTELPSLDMFKMCVNGLIRDLELYPQDEAEVFSALFM
IGQNHGKFLVSLINEVSQMIEPSSGGKLGYDNVRKASYLVLATSAPVSLKQRTCSIPPRI
FSYAVTLLGRVSRSLADIVDQRTLLAYLSYCSRFTFVSASEFFKMEEQLEKGDVLLTQRR
EISKYHAGRKLQLKEAESSHLDFQIEHNKEINCVNIMLQVVIDIWPSLKLGLIDEVTQTR
RLSLKAELGTISNNNHRGGLVFALQYIDALERLGHLWSHLVFSKEFYFHEWGKLECSLNK
LDRCLRDMRYKLVGLTKEDNFLILELIIAHGILTLCNIETCANKTTLKKLHSVISCIEHI
CGEGSTESSNFLVEVQKSLSESNTSSCPILDNPYLLLKSLEYFTPRKVVTSRNLKYMEAE
LHCQGNEFQNPLPFISGLPVGVSLDITLHNISSENMLWIKMSLEEKLTQFVFLDLHETEG
HDELRKFTFVAPFYQTPKANYFSLKICIVLECMSDDERLCRSRGGPKHEVAHLCEEKEVY
FSVEVR |
NT seq |
3081 nt +upstreamnt +downstreamnt
atggaacacctactccggcgtaatttggagaccagcgaaaacaacagtcctcaaaaagct
ctcttacaagctctttctctcatatccaacccttccacttccaactctacactttcatcc
atctccaataccctaatcctaaccctcaaaacccctaactctaacccttttatccaccat
cacattcttcgcctcttctctcttctcaaaaaccctaaccctaacctcacctccgccctc
cgtcaattctcttcatcctccacgcgctcactcgccgacaccctcgcgtgtagcaacatc
tctgttaatgatgaagaatcaacatccgtcccttcaacagcctccacgcgctcacgcgcc
gatgaactcgcgtgtagtaacgttaacgctaatgatgagtctaccttactcccttcaaca
gcctccgcgagctcactcgctggtgcacgcgcgattactaacgctgatgatgaatccaca
tatgtcctttctgcaacaacctccacgcgctcactagccgatgcacgcgcgtgtagtaac
gctgatgatgaatcagtattcgtcccttcaactacctccacgcgatcactagccgatgca
tttgcgtgtctcctctccatctccgatagtaacaacgttaacgtcaatgatgtgtcgaca
ttcctgtctcttgtttttaagccttgtgtttcggttcgtcattggttgcttttaaatgtg
agtagatttgagataaggccgtctgttttgcttacggtactgctagggtttacgaaggat
ccttatccggatattcgaaatgttgctttgattggattagctgatttgtgcaagtgtgtt
cttgtggaagatggaggtcttatacgaggttgctattttcgagctgttgagtttctgttt
gattttgaggactccgtacgatgttctgctgttcgtgcggttagtgcatgcgggcagttg
attgtgtcatctacacaagggagaagtaaagggggctggtctgatgcattatttctgcag
ctatgttcagtggtgagagacatgagtgttgaggtcagggttgaagtttttaatgcccta
gggaagattgaaattgtttctgaatatattcttttacaaatgctatataagaaagcttca
tctgcaacaaacaaaatggattttcctggccagtactctgagaaattgttcaggatacca
gcgacgagtgccagttttgcttttctacatggactggaggatgattttgttgaggtaaga
gaatctgcttgccgagctttgcgaacgttagcgatcctttctgctgagttttctaaagag
gttgtgaacttgttgatggacgcacttaatgatgattcggtggctgtaagattacaagct
ttagatacaatgcatcatatggcaatgtttggccatctaaaggtgcaacaagaacgtcta
cacatgtttctttgggttctactagacagtcacagcttgataagatgtacagcgaggaag
gtactaaaactgacggaactaccgagcttagatatgttcaaaatgtgtgttaatggactt
ataagagatttggaactgtatccccaggatgaagctgaagtcttttctgctttgttcatg
attggtcaaaaccacggaaagtttttagtcagcttgattaacgaagtttcccaaatgata
gagccctcttctggaggcaagttgggttatgacaatgtgaggaaagcttcatatctagtg
ttagccacctccgcaccagtctcattgaagcagcgaacttgcagtattccaccgcgaata
ttctcttatgctgtcacactattagggagagtctctcgcagtttggctgatatagttgac
cagagaacacttttggcttatctttcttattgcagtagattcacatttgtttctgcatca
gagttttttaaaatggaagagcagctggagaaaggtgatgttctattgacacaaagacgc
gaaatctctaaatatcacgctgggaggaaattacagctgaaggaagcagaaagctcgcat
ttagacttccagattgagcataataaagagataaattgtgtgaatatcatgcttcaggtg
gtaatagacatttggccatcactgaaacttgggttgatcgatgaagtcactcagacacgg
aggttgagtttgaaggcagaattaggaacgatatcaaataacaatcataggggtgggtta
gtgtttgctttgcagtatatagatgctttggaacgacttggacacttatggtcacacttg
gtgttctccaaggagttctactttcatgaatgggggaaattggagtgttctttgaacaaa
ctggacagatgcctgagggatatgagatataagttagtaggtttaaccaaggaggacaat
tttcttatcttagagttaataattgctcatggtatattgacactttgtaatattgaaacc
tgtgcgaacaagactactctaaagaagttacattctgtgatatcttgtattgaacatatt
tgtggagaaggatccactgaatcatccaattttctggttgaagttcagaagtcattgagt
gagagtaacacctctagttgtccaatcttggacaatccatatctccttctgaagtcactt
gagtattttactccaagaaaggtagttacgtcgaggaatctcaaatatatggaagctgaa
ctgcattgtcaaggcaatgaatttcaaaatcctcttccgttcatctctgggctgcctgtg
ggtgtatctttagatatcacactccataacatctcgagcgagaatatgttgtggataaaa
atgagtcttgaagagaaattaactcaatttgttttcctggatttgcatgagaccgaagga
cacgatgaactgaggaaattcacatttgttgcacccttctaccaaacccccaaggcaaac
tatttctcattgaagatctgtattgttctagagtgcatgtctgatgatgaacggttgtgc
aggagccgtggaggtcctaagcatgaagttgctcatctctgtgaagaaaaagaagtgtat
ttttccgtcgaagttaggtaa |