Lycium barbarum (goji berry): 132645060
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Entry
132645060 CDS
T09483
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132645060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132645060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132645060
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
132645060
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132645060
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132645060
Prokaryotic type
Other AARSs
132645060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
132645060
NCBI-ProteinID:
XP_060217802
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All DBs
Position
6:101152745..101171101
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AA seq
1110 aa
AA seq
DB search
MEATFFPKRITASNSVVFALNTAKMAMQTSSYKLWSLKSCSSLRETTSVSLLDLRSSSSA
RVFSLMNMTHYSTYSNDNACSSAKRRSRGPVMAAKKRSEGAKQEDGKYKDTVDLPKTAFG
LRANSTVREPELQKIWDDNQVFKRVVERNNGGTFVLHDGPPYANGDLHIGHALNKILKDI
INRYKLLQNFRVQYIPGWDCHGLPIELKVLQSLDDDARKELTPLKLRNKAAKFAKSTVQT
QMASFKRFGVWADWDQHYLTLHPEYEAAQIEVFGQMAIQGFIYRGRKPVHWSPSSRTALA
EAELEYNEEHVSKSMYAVFRLVGVPASCDSLKEFLPNLCLAIWTTTPWTIPANAAVAVNG
KLQYAVVEVSSASIEGSTSSGDGKKRLGNLMKRDKSLYLIVALDLVSTLEAKWGVKLTLK
KTVLGSDLENCRYTHPIDSRECPVVIGGDYITTESGTGLVHTAPGHGQEDYVTGLKYGLP
IVAPVDDDGKFTEEAGQFMGLDVLGNGNVAVIDYLNEHLSMVMVEPYKHKYPYDWRTKKP
TIFRATEQWFASVEGFRDAAMDAINQVTWIPSQAVNRISAMTSGRSDWCISRQRTWGVPI
PVFYHVDSKEPLMNEETVDHIKSIISQKGSDAWWYMAVEELLPEKYRDKASNYEKGTDTM
DVWFDSGSSWAAVLDKRESLNYPADLYLEGTDQHRGWFQSSLLTSVATKGKAPYRGVITH
GFVLDERGLKMSKSLGNVVDPRMVIEGGKNQKESPPYSADVLRLWVSSVDYTGDVLIGPQ
VLRQMSDIYRKLRGTLRFLLANLHDWKADYAVPYSDLPLIDQHALFQLANVVNNIRESYD
SYQFFKIFQVIQRFVIVDLSNFYLDVAKDRLYVGGSASFTRRSCQTVLEAHLLSIGRLIA
PILPHLAEDVWQHLPFQYTTEDGHVAKFVFESRWPELEAQHLSFPEEEVDFWGKILELRT
EVNKALEVARNGKLIGSSLEAKVYLHCSNESLAERLNKMCEPSNDADALHRIFITSQVEI
LNSLEDEMIKDVEYTGEYLMEEGNKIWIGVSRANGSKCDRCWNYSPQVGSFTEHPLLCGR
CHNVVIGLQTRNLDDLAKVTQGEAKEAIAQ
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggaagccactttttttcctaaacgcatcactgcttcaaattcagttgtctttgccctt
aatactgccaaaatggccatgcaaacctcttcttataagctatggtcattaaagagttgc
tcatccctcagggaaacaacttcagttagtttgttagatttaaggagtagctcttctgct
agagttttctctcttatgaacatgacccactactctacctactccaatgacaatgcttgt
tcctccgcgaagaggaggtcacgtggaccagtaatggcggccaagaaaaggtctgaaggg
gctaaacaggaagatgggaaatacaaggacacagtcgatcttccaaaaactgcctttggc
ttgcgagcaaattccacagtcagggaacctgaacttcagaaaatatgggacgacaaccag
gtttttaaaagagttgttgagaggaacaatgggggcacttttgttctgcatgatggacct
ccttatgcaaatggtgacttacacataggacatgctctgaataaaatcttgaaggacatt
attaatcgttataagcttcttcaaaactttagagttcagtatattccaggttgggattgc
catggcttaccaattgagttaaaagtgttgcagtcactagacgatgatgccagaaaggag
cttacaccgctaaaattgagaaacaaggcagccaaatttgcaaaatcaacagtgcagact
cagatggcatcatttaagcgctttggagtatgggctgactgggatcaacattatctaact
cttcatccagaatatgaggctgcacagattgaagtatttggccagatggctattcaaggt
tttatctacagaggcaggaaaccagttcattggagtccctcatctcgaactgcacttgca
gaggctgaactggagtataatgaggagcatgtgtcaaagagcatgtatgctgttttcaga
ctagttggtgttccagcttcatgtgactcattgaaagaattcttgcccaatctatgcttg
gcaatttggacaacgactccttggacaataccagctaatgctgctgttgcggttaatggt
aagcttcaatatgccgttgttgaagtttcctcagcatctatagaaggttctacatcttcc
ggggatggaaaaaagaggcttggaaatttaatgaagcgcgataaaagcctatatcttatt
gtagctctggaccttgtatcaacattagaagcaaaatggggcgtgaagcttactttgaag
aaaacggtactgggttcagatcttgaaaattgcaggtacactcatccgatagatagccgg
gaatgccctgttgtcattggtggtgattacattacaacagagtcaggaactggattagtt
catactgcacctggtcatggacaggaagattatgtaactggcttgaagtacggcttgcct
atagttgcccctgttgatgatgatgggaaatttacggaagaagctggacaatttatggga
cttgatgtgcttggcaatggcaatgttgctgttattgattacttgaatgaacacctgtca
atggtcatggtagagccgtacaaacacaaatacccttatgactggagaacaaagaagccc
actatattcagggctactgaacaatggtttgcatcagtagaaggatttcgtgatgctgca
atggatgcaattaaccaagtaacttggattccttctcaggcagtaaaccgtatttctgct
atgacatctggccgctctgattggtgtatatcacgccaaaggacatggggagtccccatt
ccagtgttttaccacgttgactcaaaggagccactgatgaatgaagagactgtagatcac
attaaatcaataatttcccaaaaaggaagtgatgcatggtggtacatggcagtggaggag
ttacttcctgagaaatatcgcgataaagcatcaaactatgaaaaagggactgatacgatg
gatgtctggtttgactcaggttcgtcgtgggctgcggtgctggacaaaagagaaagcctc
aattaccctgcagatctgtatcttgaggggacagatcaacatcgtggttggttccagagt
tccttattaacaagtgttgccacaaaaggcaaggccccttatcgtggtgttattacacat
ggatttgtactcgatgagaggggtttgaaaatgagcaaatctttgggcaatgttgttgat
ccaaggatggtgattgaaggagggaaaaaccaaaaggaaagtcctccatatagtgctgat
gtcttaaggctttgggtttcaagtgtagactatactggtgacgtgctgattggacctcaa
gtccttcgtcaaatgtctgacatataccggaaattgcgaggaacacttcgattccttcta
gcaaacctccatgactggaaagctgattatgctgtcccgtatagtgatcttccattgatt
gatcagcatgctttattccagcttgctaatgttgtgaacaacatcagagagagctatgat
agttatcagttttttaaaatatttcaggtgattcagcgctttgtaatagttgacctctca
aacttctatctcgatgttgcgaaggatcggctttacgttgggggcagtgcaagttttaca
aggaggagttgtcaaacagtccttgaagcccatttgctttcaattggaaggttaattgct
cccatcttacctcatttggctgaggatgtgtggcagcatcttcctttccagtatactact
gaagatgggcatgttgctaaatttgttttcgagtcaagatggcctgaactagaggcacaa
cacctttcctttccagaagaagaagttgacttttgggggaaaattcttgagttaaggaca
gaagttaataaagcattggaagttgctcgaaatggaaaattgattggctccagtttagaa
gccaaggtgtatctccactgctctaatgaaagcctggctgagaggctaaacaaaatgtgc
gaaccttcaaatgatgcagatgctctacatcgcatatttataacatctcaggtggagatt
ctcaactccttggaagatgaaatgattaaagatgttgagtacactggagaatacctcatg
gaagaagggaacaaaatctggattggtgtatcccgtgcaaatggctcgaaatgtgacaga
tgctggaattattcacctcaagttggttcatttactgagcatcctttgctatgtggccgc
tgtcacaacgtggttatcggtctacaaactcgtaatcttgatgatttagccaaggtcaca
cagggtgaagcaaaggaggctatagcacaatga
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