Lycium barbarum (goji berry): 132645335
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Entry
132645335 CDS
T09483
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03420
Nucleotide excision repair
lbb04120
Ubiquitin mediated proteolysis
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132645335
04120 Ubiquitin mediated proteolysis
132645335
09124 Replication and repair
03420 Nucleotide excision repair
132645335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132645335
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132645335
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
132645335
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132645335
Multi subunit type E3
SCF complex
Ring finger protein
132645335
Cul2 complex
132645335
Cul3 complex
132645335
Cul4 complex
132645335
Cul7 complex
132645335
Cul8 complex
132645335
Cul9 complex
132645335
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132645335
TCR (transcription coupled repair) factors
Cul4-CSA complex
132645335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
132645335
NCBI-ProteinID:
XP_060218256
LinkDB
All DBs
Position
1:complement(153647424..153652482)
Genome browser
AA seq
120 aa
AA seq
DB search
MDTDVEMAPAGEGSTVAVPSTASSSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacgtagaaatggctcctgctggtgaaggatccaccgttgccgtaccttca
acagcttcttcttcttcttctacgaagaaaccaaagcgttttgagatcaaaaagtggaac
gctgtctctttatgggcttgggatattgttgtggacaactgtgctatttgcaggaaccac
atcatggacctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgc
actgttgcctggggtgtatgtaatcatgccttccactttcactgcattagtcgatggctc
aaaacccgtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcac
tag
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