KEGG   Lycium barbarum (goji berry): 132645335
Entry
132645335         CDS       T09483                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03420  Nucleotide excision repair
lbb04120  Ubiquitin mediated proteolysis
lbb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132645335
   04120 Ubiquitin mediated proteolysis
    132645335
  09124 Replication and repair
   03420 Nucleotide excision repair
    132645335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lbb04121]
    132645335
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132645335
Enzymes [BR:lbb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     132645335
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   132645335
  Multi subunit type E3
   SCF complex
    Ring finger protein
     132645335
   Cul2 complex
     132645335
   Cul3 complex
     132645335
   Cul4 complex
     132645335
   Cul7 complex
     132645335
   Cul8 complex
     132645335
   Cul9 complex
     132645335
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132645335
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132645335
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 132645335
NCBI-ProteinID: XP_060218256
LinkDB
Position
1:complement(153647424..153652482)
AA seq 120 aa
MDTDVEMAPAGEGSTVAVPSTASSSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atggatacagacgtagaaatggctcctgctggtgaaggatccaccgttgccgtaccttca
acagcttcttcttcttcttctacgaagaaaccaaagcgttttgagatcaaaaagtggaac
gctgtctctttatgggcttgggatattgttgtggacaactgtgctatttgcaggaaccac
atcatggacctctgcattgaatgtcaagctaatcaagctagtgctactagcgaggagtgc
actgttgcctggggtgtatgtaatcatgccttccactttcactgcattagtcgatggctc
aaaacccgtcaagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcac
tag

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