KEGG   Laccaria bicolor: LACBIDRAFT_188794
Entry
LACBIDRAFT_188794 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
lbc  Laccaria bicolor
Pathway
lbc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LACBIDRAFT_188794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_188794
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     LACBIDRAFT_188794
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_25 SMC_N AAA_29 AAA_15 RsgA_GTPase AAA_23 AAA_28 AAA_33 PduV-EutP MMR_HSR1 NACHT
Other DBs
NCBI-GeneID: 6072362
NCBI-ProteinID: XP_001877109
JGI: 188794
UniProt: B0CY81
LinkDB
AA seq 292 aa
MHAISVTNLSYSHNSFSPPALQDITLHLPPGSRTILIGANGAGKSTLLQLLAGKRLVTSL
GADIRIEGRDVFRDSPPGVTYLGTEWAMNPVVRSDIAVSAFLDSVGGHQHKERRDCLLDL
LDIDLDWRLHTISDGERRRVQLCFGLMAPWKILLLDEVTVDLDVLVRDDLLRFLKADSEE
RQATILCKITSLHHATHIFDGLSDFPTHIAHMRFGSLVESPTHWPISNSSVPAAQFSASS
SLHSIALSWLKDDRVYQQGNEKHGKKARGARKNEVPQALSPETFYKKYDYSH
NT seq 879 nt   +upstreamnt  +downstreamnt
atgcacgccatctccgtgactaacctctcctactcacataattccttctcacccccggcc
ttgcaagacattaccctccacctacctcctggatcccgcaccatccttattggagccaat
ggagctggcaaatccaccttgcttcaattattggcgggcaaaagacttgtcacttctctc
ggcgctgacattaggattgaaggacgagatgtattccgcgattcaccacctggcgtcaca
tatttgggtactgaatgggcgatgaatccagttgtgcgcagtgatatcgctgtctcagct
tttttggattctgtaggaggtcatcagcataaagagaggcgagattgccttcttgacctc
ctggacattgatctcgattggcgtctgcatacaatttctgatggagaaaggcgtagggtg
cagctttgctttggactcatggcaccctggaagattcttttgctcgacgaggttacagtc
gatttggatgtgctggtacgcgatgatctgcttaggttcctcaaagcggacagtgaagaa
cggcaggcaactattttatgcaagatcacttcccttcatcacgcgactcacatctttgac
ggactgagtgattttccaacacacatcgcacacatgcgtttcggctcgctcgtagaaagt
ccaactcattggccgatttccaattcatcagttccggctgcccaattttccgcgtcttca
tctcttcacagcattgctttatcctggctcaaagatgacagagtctatcaacaaggaaac
gaaaaacatggcaagaaggcccgcggtgctcgtaagaatgaggtgccccaggccttgagt
cctgaaacattctataagaaatacgattatagccattga

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