KEGG   Laccaria bicolor: LACBIDRAFT_246149
Entry
LACBIDRAFT_246149 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
lbc  Laccaria bicolor
Pathway
lbc03018  RNA degradation
lbc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LACBIDRAFT_246149
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LACBIDRAFT_246149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_246149
   03041 Spliceosome [BR:lbc03041]
    LACBIDRAFT_246149
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LACBIDRAFT_246149
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LACBIDRAFT_246149
Spliceosome [BR:lbc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LACBIDRAFT_246149
 Complex C
  U2 snRNP components
    LACBIDRAFT_246149
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 6072878
NCBI-ProteinID: XP_001877046
JGI: 246149
UniProt: B0CXT9
LinkDB
AA seq 96 aa
MDLSSSGIQEPFDLIRLSLSERVFVKLRGDRELTGILHAYDGHMNLIMSDVEETILIVDT
DSVPTGQGVLQVAKRKMEMLFVRGDGVILVSPPART
NT seq 291 nt   +upstreamnt  +downstreamnt
atggacctttcatcttcgggaatccaggagccttttgacctgatcagactttcactcagt
gagcgggtgtttgtaaagttgagaggagatcgggaattgactgggatcctgcatgcttac
gatggccacatgaatttgataatgagcgacgttgaggagacgatcttgatcgtggatacg
gacagcgtgccaactggccagggcgttctacaggttgcaaaacggaagatggaaatgctc
ttcgtaagaggggatggtgtcatcttggtatcaccaccagcgcgaacatag

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