Laccaria bicolor: LACBIDRAFT_292340
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Entry
LACBIDRAFT_292340 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
lbc
Laccaria bicolor
Pathway
lbc03008
Ribosome biogenesis in eukaryotes
lbc03013
Nucleocytoplasmic transport
lbc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_292340
03008 Ribosome biogenesis in eukaryotes
LACBIDRAFT_292340
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LACBIDRAFT_292340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_292340
03009 Ribosome biogenesis [BR:
lbc03009
]
LACBIDRAFT_292340
03016 Transfer RNA biogenesis [BR:
lbc03016
]
LACBIDRAFT_292340
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_292340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbc04147
]
LACBIDRAFT_292340
04031 GTP-binding proteins [BR:
lbc04031
]
LACBIDRAFT_292340
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LACBIDRAFT_292340
Ribosome biogenesis [BR:
lbc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
LACBIDRAFT_292340
Pre-60S particles
LACBIDRAFT_292340
Transfer RNA biogenesis [BR:
lbc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
LACBIDRAFT_292340
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
LACBIDRAFT_292340
Spindle formation proteins
LACBIDRAFT_292340
Exosome [BR:
lbc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LACBIDRAFT_292340
GTP-binding proteins [BR:
lbc04031
]
Small (monomeric) G-proteins
Ran Family
Ran
LACBIDRAFT_292340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
G-alpha
MMR_HSR1
GTP_EFTU
DUF5118
Pox_A32
DUF5906
AAA_7
AAA_24
AAA_16
TsaE
AAA_22
Motif
Other DBs
NCBI-GeneID:
6070566
NCBI-ProteinID:
XP_001875465
JGI:
292340
UniProt:
B0CSV2
LinkDB
All DBs
AA seq
216 aa
AA seq
DB search
MSDQTPTIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLQFSTNFGNIC
FNVWDTAGQEKFGGLRDGYYIQGQCGIIMFDVTSRITYKNVPNWHRDLERVCENIPIVLC
GNKVDVKERKVKTGAVTFHRKKNLQYFEISAKSNYNFEKPFLWLGRKLVGNPGLEFVAAP
ALAPAEVTVDENLMKQYQQELLQAEAVPLPEDDEDL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaaaccccgaccattcctactttcaagctcgttctagtcggcgatggtggt
acaggcaaaacaacttttgtcaagcgccacttgactggtgaatttgaaaagaagtacatc
gctactttgggtgttgaggtccaccccttacaattctccacaaatttcggcaacatctgc
ttcaacgtttgggacactgccggccaggagaagtttggtggtctccgtgatgggtattac
atccaaggccaatgcggtatcatcatgtttgacgtcacttcgcgaatcacctacaaaaat
gtccccaattggcatcgcgacctcgaacgcgtctgcgagaacatccccatcgtgttgtgt
ggtaacaaggtcgatgtaaaggagcgcaaagtgaagactggcgctgtcacattccaccgc
aagaagaaccttcaatactttgaaatttccgcaaagtccaactacaacttcgagaagccc
ttcctttggcttggccgcaagcttgttggcaatcccggtctggaattcgttgctgcccca
gctttggcccctgctgaagtcaccgtggacgaaaacttgatgaagcagtatcaacaagag
ctccttcaggccgaagcggttcctcttcccgaggatgacgaagacctgtaa
DBGET
integrated database retrieval system