Laccaria bicolor: LACBIDRAFT_313755
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Entry
LACBIDRAFT_313755 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lbc
Laccaria bicolor
Pathway
lbc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LACBIDRAFT_313755
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbc01007
]
LACBIDRAFT_313755
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbc03016
]
LACBIDRAFT_313755
Enzymes [BR:
lbc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
LACBIDRAFT_313755
Amino acid related enzymes [BR:
lbc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LACBIDRAFT_313755
Transfer RNA biogenesis [BR:
lbc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LACBIDRAFT_313755
Prokaryotic type
Other AARSs
LACBIDRAFT_313755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
6073307
NCBI-ProteinID:
XP_001877408
JGI:
313755
UniProt:
B0D0R9
LinkDB
All DBs
AA seq
1078 aa
AA seq
DB search
MSFAPHDVSASFDFSKEETKVLAFWKEIDAFQTSLKLSEGKPAFTFYDGPPFATGLPHYG
HLLAGTIKDIVTRHAHVSGYHVSRRFGWDTHGLPVEHEIDKRLGITGKEDVMKMGIDKYN
EECRKIVMRYSSEWRQTVERMGRWIDFDNDYKTLNLPFMESVWWAFSELFKKGMVYRGLR
VMPYSTGCTTPLSNFEAGQAYQDVNDPAVTVAFPLVDDPSTSLLAWTTTPWTLPSNLALC
VHPDYTYIKIHDAERNQNFIIHEGLLKTLYKDPKKAKYKKLGQFHGSDMKGWRYVPLFEY
FTDQFEDKAFRVVVDTYVTDADGTGIVHQAPAFGEDDHRIAIANGVLRPDEMPPCPIDDR
GIFTKEVPDFAGLHVKAADSPIQKVLKAKGRLIVQSTLNHSYPFCWRSGTPLIYRAIPVW
FVRVTPIVEQLVANNEGTRWVPQNVGENRFGNWLANARDWNVSRNRYWGTPMPLWVSDDM
EEIVCVGSVEELERLSGVTGINDIHRDKIDHITIPSQKGKGVLRRVEEVFDCWFESGSMP
YAQQHYPFENKELFERTHPADFVSEGIDQTRGWFYTLLVLSTHLFGKAPWKNLIVTGLVL
AADGKKMSKSLRNYPDPNIIIDKYGADATRMFLVNSPIVRGDNLRFREDGVREVIARVLL
PWLNSFRFFLGHVALFKKVNGIDFTYNAHAPLPNNVMDRWILARCQSLIKLVREEMAAYR
LYTIIPRLLDLIDELTNWYIRFNRKRLKGEDGKEDTNLALNTLFEALLTLCRTLSSYTPF
ITENLYQSLRNFIPEDPSAGDTRSVHFLSFPEVKEEYFDADIERQVKRMQAVIELSRNIR
DRTNLSLKVPLKELLVFHPDQEYIADIEPLQRYIQSELNVRDITFSSDETLSGVRYKAVA
DWAILGKKLRKDLGRVKNALPNVASDAVKNFITTGSIVVDGIELVTGDITVQRYLDLPAG
SEGLYATHTDNDVVVRLDIQIHADLQGEWLARELTNRVQKLRKKAGLQAIDDVNIFYRFE
EGSGSELLAAIEGNADIITKTVGCLPVDVKERKETSEVLIEEEQEVADVKFMLYLARP
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgcccctcatgacgtttccgcttcctttgatttttcaaaggaagaaacaaaa
gttctcgcattttggaaagagattgacgcgtttcagactagcttgaaactttctgaaggc
aaaccagcatttactttctacgatggtcctccgttcgccactggccttcctcactacgga
catctgcttgctgggacgatcaaggatatcgtgactcgacatgcccacgtcagcgggtac
cacgtatcccgtcgattcggctgggatacgcacggcctgcccgtagaacacgaaatagac
aaacgcctcgggatcaccggcaaggaggatgtcatgaaaatgggcattgacaagtacaac
gaagagtgccgaaagatcgtcatgcgctattcgtccgaatggcggcagactgttgagagg
atgggccggtggatcgatttcgacaacgattataaaacgctgaatcttccttttatggag
tcggtgtggtgggcttttagtgagctgttcaagaagggaatggtatatcgtgggttgagg
gttatgccgtattcaactggatgtaccacgcctctttcgaattttgaagctgggcaagcg
tatcaagacgtgaacgaccccgctgtcaccgtcgcgttccctttggtggacgaccccagc
acgtcgttgttagcatggacaacgacgccttggacactgccctccaatctagccctttgt
gttcatccggactacacgtacatcaagatccacgacgcagaacgcaaccagaattttatc
attcacgaaggactgctgaaaactttgtataaagatccgaaaaaggcaaagtacaagaaa
cttggtcaattccatggttcagatatgaagggatggcgctatgtgccgctattcgaatat
tttactgaccagttcgaagacaaagctttcagagtcgtggtagatacatatgtcaccgac
gctgacggtacgggtatcgtccaccaggcgcctgcctttggcgaagatgaccaccgcatc
gccatcgcaaacggcgtattgcgacccgatgagatgccaccctgtcccatcgatgatcgc
ggcatatttacaaaagaggttcctgactttgccggacttcatgtcaaggcggcggatagc
ccgatccagaaagtgctcaaagccaagggtcgacttatagttcagtcgacgctcaaccat
agctatcctttctgctggaggtccggaacgcccttgatttatcgcgcgattccagtatgg
tttgtcagagtgacaccgatcgtagaacaacttgttgctaacaacgaagggacaagatgg
gtaccacagaacgttggtgaaaatcgatttggtaattggcttgcgaatgccagggattgg
aatgtttcaaggaaccgttactggggcacaccgatgcctttgtgggtcagcgatgacatg
gaagagattgtatgcgttggctcagtggaagaactcgaaagattatccggcgttacagga
atcaacgatatccatcgggacaagatcgaccacatcaccattccatctcagaagggaaaa
ggagtcctgagacgtgttgaagaggtttttgattgctggtttgagtccggcagcatgccg
tatgcgcaacaacattatccatttgagaacaaggagctgttcgaacgcacccaccctgcc
gattttgtatccgaaggcatcgatcaaactcgaggctggttctataccctcttggtactt
tcgacacatctatttgggaaagcaccgtggaagaatttaattgtaaccggactcgtcctt
gccgcagatggcaagaagatgagcaagagcctgcgaaattatcctgatccaaacatcatc
atcgacaagtatggtgctgacgcgacaagaatgttcctcgtcaattcgcctattgtacgt
ggtgacaatctgcggttccgtgaggatggtgtccgcgaagtcatcgcccgcgttctttta
ccctggctcaactccttccgatttttcttggggcacgttgcgctgttcaagaaggtaaat
ggcatcgatttcacctacaacgcacatgccccactgccaaacaacgttatggaccgatgg
atccttgctcgttgtcagtccttgatcaaactagtcagggaagaaatggcggcttatcga
ctttacaccatcatcccccgcctcctggatctcatcgatgagctcacgaattggtacatt
cgattcaatcgcaaacgcctcaaaggcgaggacggcaaggaagataccaacttggctctt
aataccctatttgaagcactccttacactgtgccggaccttgtcttcatatacgcccttc
ataacggaaaacctctatcagtcattgcgaaattttattccagaagatccttccgctggg
gacactcgttccgttcatttccttagtttccccgaggtcaaggaagaatacttcgatgcg
gacattgaacgccaggtgaagaggatgcaggctgtcatcgaactctcaagaaatattcgc
gatcggaccaatttgtcgctcaaggtgccgttaaaggagctattggtgttccatcccgac
caggaatatattgcagatatcgaacctttgcaacgatacatacaatcggagcttaacgtt
cgcgatataacattttcatccgatgagaccctatctggcgtgcgatataaagcggtggcg
gactgggctattttgggcaagaagttgcgcaaggacttgggccgtgtaaagaacgcgttg
ccgaacgtcgccagcgatgcagtcaagaactttatcactacaggaagtatcgtggttgac
ggaattgagctggttactggtgatatcacagtccagcggtaccttgatcttccggctggg
tcggaaggtctttacgccacacacacagacaacgacgttgtcgttcgccttgacatccag
atacacgccgacttgcaaggcgaatggttggctcgcgagcttaccaaccgcgttcagaaa
ctacggaagaaagccggtctccaggctatcgacgatgtcaatattttctaccgctttgaa
gaaggttcgggcagtgaattgcttgctgctatagaagggaacgcagatatcatcacgaaa
acggttggatgtcttcctgtggatgtgaaagagcggaaggagacaagcgaggttctcatt
gaggaagagcaggaagtggccgatgtgaagttcatgttatatctggcgaggccgtag
DBGET
integrated database retrieval system
