Lodderomyces beijingensis: 92207664
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Entry
92207664 CDS
T10315
Symbol
LODBEIA_P24680
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lbg Lodderomyces beijingensis
Pathway
lbg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92207664 (LODBEIA_P24680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbg03041
]
92207664 (LODBEIA_P24680)
Spliceosome [BR:
lbg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
92207664 (LODBEIA_P24680)
Complex C
U5 SnRNP specific factors
92207664 (LODBEIA_P24680)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFTUD2
Septin
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
92207664
NCBI-ProteinID:
XP_066829406
LinkDB
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Position
3:complement(900128..903037)
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AA seq
969 aa
AA seq
DB search
MDDEAIYDEFGNLIGDETGSDAGESVEEAPDVIVADGEPAAASPPSTHQASQSNHTHLHS
QALVKRDLSTDTGEIIYVHTTDAASNEPVIAPNTQKSMKTTIDEENQPKTTYSREFLKNT
LDKLPERIRNVAVVGACQSGKTRFIDQLVLQTHPSIFESDYSKIFKPLRFMDDHKLEKAR
EQSFKTSAMTLLLQDHRSRSFAFNILDTPGHIDFNDEVVAGLELCDGAILVLDVVIGLSH
RDQRLIDEIMKRNLPMIVVLNKIDSLILQLQLPAKDSYLKMFNIIDDVNIYIKQSSLYRE
SYTHELEFSPILNNVMFASAEFGISFTLSSFAALYSRIQLQNRLDADLLWGEYFYNSQAN
KVTTDSQSGQYPRTFVEFVLNTIYSLASLVLISMPGDKKLPQALWDNFGVTLPKREYKKE
VRDVLKSVFVAVFKEDTGFVDAVTENFPSPKKTIATDNDDDRDNSSRSMLGKVTKLVESS
NGEHFLSLARIYSGTLKVDDEVDVITRGSNGGGGGDDEETITRRETIRQIYLPGGRYNIP
VTEIGPGTIVLIGGIDSSIKKGATIMSTENVQDSAFPVPAYSVNSVFKVSIEAVDARHRT
RLLESLRKANKAYLSSVVDVAETGECTIQAPGELYMDCVLHDVRFFFADDLQIRVSDPFT
IFSETCTEPSFTSIPVSTNSGDFSISIMAEPVDDPKLSNAIESGVLNSHLTRGEMSKILK
SDFGWDALAARSIWSFAPADLIEPDILIDDTLEIETDKSKLLKTKESIKSGFKWSTNEGP
LVGETIRNTKFKILTTNFKTDTQLNPAQIIPLTRRACYVGFLTAKPRLMEPMYQAIAICS
HKNLKVIRKLLDSRRGYIQSQHEIEGTPLFTVEGYLPVIDSVGFLSEVKQHTQRHASAWL
VFSHWQIVPGDPFDLHCELPKLEPAPEESLARDFLKKTRNRKGLTGEPTLQKYIDADIYI
KLKERGLVL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaggcgatatatgacgagtttggcaatctaataggagacgaaactggctcc
gacgctggagaaagcgtcgaagaggctccagacgtgatagtggcagacggggagcccgct
gctgcatcgccgccatctacacaccaggccctgcagtcgaaccatacacatttacattcg
caagcactagtgaaaagggacctatcaaccgacacgggagagatcatctatgttcacact
acagatgcagcctcaaatgagccagtcatcgcgcccaatactcaaaagtcaatgaagacg
accattgatgaagaaaatcaaccaaagacgacttactctcgcgagtttctcaagaatacc
ttggataaactaccggaacggatacggaacgtggcagtggtaggtgcgtgtcaatcaggt
aaaaccaggtttatcgatcagctagttttgcaaactcacccgtctatattcgagctggac
tattccaagattttcaaaccgttgcgatttatggatgaccacaagttggaaaaggcaaga
gagcagagttttaaaacttcagctatgaccttgcttttgcaggaccacagatcccgctcc
tttgcattcaatatcctagatacaccaggccacattgacttcaacgacgaagttgtagcg
gggcttgaactctgcgatggcgcgattcttgtcttggatgtggtgattgggctttcgcat
cgagaccagcgactcattgatgagataatgaagcgcaacttgcccatgattgtcgtgctc
aataaaatcgatagcttgattttgcaattgcagctcccggccaaggactcgtatttgaag
atgttcaacatcattgacgatgttaacatttacattaagcagagctccttgtaccgagaa
agctacacgcatgagttggagttttcacctattttgaacaatgtcatgtttgcatcggcc
gagtttgggatctcgttcaccttactgagctttgctgcgttatactcgcgtattcaactt
caaaatcgactcgacgctgacttgctatggggagagtatttctataactcacaagcgaat
aaagtcactaccgattcacaaagtgggcaatacccaaggacgtttgtggagtttgtgttg
aacactatttacagcctcgcgtcgctagttctaatatccatgcctggtgataaaaaatta
ccacaggctctttgggataattttggagtgactcttcccaaaagggaatataagaaagaa
gttcgcgatgtgttgaagtcagtgtttgttgctgtattcaaagaggacacggggtttgtt
gatgcagttaccgagaattttcctctgccgaaaaaaactatagcaaccgacaatgatgat
gatcgtgacaatagcagcaggctgatgcttgggaaagtgacgaaattagttgagtcgctg
aacggtgagcatttcctcagtttggcgagaatctactcgggcaccttgaaagttgatgac
gaagtcgatgtaatcacgagaggctccaatggtggtggcggcggtgacgacgaggaaact
ataacaaggagagaaactatcaggcagatatacttgccaggtgggaggtacaatatccca
gtgacagagattggaccaggcaccattgtattaataggaggtattgactctagcatcaag
aaaggggccaccattatgtccactgaaaatgtgcaagattcagccttccccgtaccagcg
tactccgtcaactccgttttcaaggtttcaatcgaagcagtggacgcccgtcacaggacc
cggctactagagtcactacggaaagcaaacaaggcctacttatcctccgttgttgacgtg
gccgagactggagaatgcacaatccaggcaccaggtgaactatacatggactgcgtattg
cacgatgtgagatttttctttgctgacgatttgcagattcgagtcagtgaccccttcact
atcttttcagagacgtgcaccgaaccctcattcactagcatcccagtatcgacaaactcc
ggcgacttctccatttcgatcatggccgaacccgtggatgatcccaaattgagcaacgcc
atagaactgggcgtgctaaactcgcatctcaccagaggggaaatgtccaaaattttgaaa
tcggatttcggatgggacgcgttagccgctagaagcatctggtcatttgcgcctgcggat
ctcatcgaacctgatatattgatagacgatacgttggagattgaaacggacaagtcgaaa
ctattgaaaaccaaagagtccatcaagtctggattcaaatggagcaccaacgagggcccc
ttggttggtgaaacgatcagaaacaccaaatttaaaatattgaccaccaatttcaaaacc
gatacccagctaaacccagcgcaaatcatcccattaacacgtcgcgcgtgctacgtaggt
ttcctcacggccaagcctcgattaatggaacccatgtaccaagcaatcgcaatctgctcg
cacaagaacttgaaagtgattcgcaaactattggatctgagaagaggatacattcaatct
caacacgaaatcgagggtactcccttgttcaccgtggaagggtatttgccagttattgat
agcgtggggttcctatctgaggtgaaacagcatacgcaaagacatgcgctggcgtggctt
gtgttttcgcattggcagattgtacctggggaccccttcgatttgcattgtgagttgccc
aagcttgaacctgccccggaagaatcgttagcgagagactttctcaaaaagacgcgaaac
aggaaagggttaacgggcgagccaactttacaaaaatacatcgatgctgatatttacata
aagttgaaagagcgtggactagtcttgtaa
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