KEGG   Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_0105
Entry
LBUCD034_0105     CDS       T02244                                 
Symbol
casD
Name
(GenBank) CRISPR system casD CASCADE complex protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
lbn  Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:lbn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lbn02048]
    LBUCD034_0105 (casD)
Prokaryotic defense system [BR:lbn02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    LBUCD034_0105 (casD)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: AFR99217
UniProt: J9VXN2
LinkDB
Position
123105..123857
AA seq 250 aa
MKTLLIRLTSPLQSYGNEATFSRRTSGDYPSKSAVIGMIAAAFGYHRDDSRITHLNNLSF
AVRVDQPGTTLTDFQTVEWKKNTRKITYRNYLQDAVFVVGVGSNNDQQIDNIKEALRRPQ
FQLFLGRRSNVPAGVLKMTVVPNADPVKALQRLEWQASRWHQRRYLRREQKQYAENVELI
ADANLLPEQRSAMVKDRVVSFDQRHRQHGYRAFATKTLNRVKLNDSYIQRPDTDVAHNQV
ETSHDAFDAV
NT seq 753 nt   +upstreamnt  +downstreamnt
atgaagacactactaattagattaacgtcacctttgcagtcgtatggaaatgaggccact
ttttccagaagaaccagtggcgactatccgtcgaagagtgctgtaattggtatgattgcc
gctgcctttggctatcatcgagacgattctcgaattactcatctgaataacttgagtttt
gccgttcgggttgaccagccggggacgacactgacggatttccaaacggtggagtggaag
aagaataccagaaagattacttatcggaattaccttcaggacgccgttttcgtcgttggc
gtgggtagtaacaacgatcaacagattgataacatcaaagaggcattaagacggccgcag
tttcagctgtttttagggcgcagatcgaacgtccctgcaggggtgctcaaaatgacggtt
gtcccgaatgctgatccggtaaaagcactgcaacggttggagtggcaagcttcacgctgg
caccagagaagatatttgcggcgtgagcagaaacagtatgccgaaaatgttgaattgatc
gcagatgctaatttattgcctgaacaaagaagcgcgatggtcaaggaccgggtcgtctcg
tttgaccaacggcaccggcaacatggctaccgggcatttgccactaagacgcttaaccgt
gttaagctgaatgattcatacatccaaagacctgacactgatgtcgctcacaaccaggtg
gaaaccagccacgacgcattcgatgcggtctag

DBGET integrated database retrieval system