Leptolyngbya boryana: LBWT_53410
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Entry
LBWT_53410 CDS
T04848
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lbo
Leptolyngbya boryana
Pathway
lbo01501
beta-Lactam resistance
lbo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LBWT_53410
01503 Cationic antimicrobial peptide (CAMP) resistance
LBWT_53410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbo03036
]
LBWT_53410
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbo02000
]
LBWT_53410
01504 Antimicrobial resistance genes [BR:
lbo01504
]
LBWT_53410
Chromosome and associated proteins [BR:
lbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LBWT_53410
Transporters [BR:
lbo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LBWT_53410
Antimicrobial resistance genes [BR:
lbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LBWT_53410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
YkyA
Motif
Other DBs
NCBI-ProteinID:
BAS59372
LinkDB
All DBs
Position
complement(5658285..5659721)
Genome browser
AA seq
478 aa
AA seq
DB search
MNGENTDRAGFAQTDAPVSELPPRRPRWRKFLIPGLIGLAVVGGLGWIVFNRIILPLMIV
SQMKPQPTPVPLANPKSSTIEDSSDYAATLDSRQSITLQPQVSGQISQIYVRPGQQVTAG
QAILQIDNREQRAQVASRQSASQTAAADIDSAQADVENEQQTLRSLQAQRATALSNVQLN
QKEYDRFVELQRQGATSKQILDQRLNALQTAQAALRQADADIAAQRSAISRAQSVVERNR
RAFEQSQANIAEGQAQLQYYTITAPFTGTVGEIPIKVGDTVSPTSQLLNITQNQQLEVQI
QVPLERSSALRLGLPVKLLDDQGKEVQTGRISFVAPNVDSTTQSVQAKAVFENVRNLRPS
QFVRARVVWSNRPGVLVPTTAISRLGGRDFIFVAAPLSASGCSEPAAPQGGGKFEANPDM
LVAAQKPIQLGRIIGNEQEVVEGLSANDRIITSGILQLQNCAAIMDAAQVPAQQSSQQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcgaaaataccgatcgcgctggattcgctcagacagatgccccagtttcagaa
ttgccgcctcgtcgtccgcgctggcgtaaatttctgattccagggttaattggacttgca
gttgttggcggattgggttggattgtctttaatcggattattctgcctctgatgattgtg
agtcagatgaagcctcaaccgactccagtcccgttggcaaacccgaaaagttcaacgatc
gaagatagctctgactatgccgctaccttagattctcggcaatccattacgcttcaaccg
caggtcagtggacagatttcgcaaatctatgtcagacctggtcagcaagtgactgccggg
caagctattttacaaattgacaatcgcgaacaacgtgctcaagttgcgagtcggcaatcg
gcatcgcaaacggcagcagcggacattgattcagcccaagcagatgttgaaaacgaacag
caaactttacgatcgctgcaagctcagcgtgcgacagcactttcaaacgtgcaattgaac
cagaaagagtacgatcgctttgtcgaattgcaaagacagggcgcaaccagtaaacaaatt
cttgatcagcgtttaaatgctctacagactgctcaagcagccttgagacaagcagatgca
gatattgctgcgcaacgttctgcgattagccgtgcgcaatccgtcgttgagcgaaatcgc
cgagcttttgaacaatcccaagccaatattgcagagggacaagctcaattgcagtactat
acgatcactgctccttttactggaaccgttggggaaatcccgattaaagtcggtgataca
gtgagtccgacctcccaattgttgaatattactcagaatcagcaattagaagttcagatt
caagtcccgttagagcgatcaagtgctttgcggttaggcttacctgtcaaactgctcgat
gatcaaggcaaagaagtacagacaggtcgaatttcctttgttgccccgaatgttgattcg
actacgcaatcagtgcaagcaaaagcagtctttgagaatgtgcggaacttgcgaccttcg
caatttgtgcgcgcgcgcgttgtttggagtaatcgacctggcgtactcgtgcccacaacg
gcaatctctcgattagggggaagagattttatttttgttgctgctccgctaagtgcatcg
gggtgttcagagccagccgcacctcaagggggcggaaaatttgaagcgaatccggacatg
ttagttgcagcccaaaagccgattcaactcggcagaattattggcaatgaacaagaagtc
gtcgaaggactgagtgccaacgatcgcattattacttctggaattttgcaactgcaaaat
tgtgctgcgatcatggatgctgctcaagttcctgctcaacagtcttctcagcaatag
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