Lachnospiraceae bacterium JLR.KK008: V1224_10480
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Entry
V1224_10480 CDS
T10585
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
lbp Lachnospiraceae bacterium JLR.KK008
Pathway
lbp00300
Lysine biosynthesis
lbp00550
Peptidoglycan biosynthesis
lbp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V1224_10480
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1224_10480
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lbp01011
]
V1224_10480
Enzymes [BR:
lbp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V1224_10480
Peptidoglycan biosynthesis and degradation proteins [BR:
lbp01011
]
Precursor biosynthesis
Amino acid ligase
V1224_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
DFP
DUF5064
Motif
Other DBs
NCBI-ProteinID:
WWR14919
LinkDB
All DBs
Position
complement(2082466..2083944)
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AA seq
492 aa
AA seq
DB search
MVQALTLLERLTYTCVKGDPDREVGALVYDSRKIERDCMFVCIAGANVDGHSFAAEAAEK
GAAVIVVEKEVEIPDESGATMIRVADTRYALAFLSAAYFGYPAEQMKIIGITGTKGKTTT
TYLVKSILEHAGRTVGLIGTIEAVIGERHIPAANTTPESYVLQQYLREMADAGCDTVVME
VSSQGLMMHRTQGFVFDIGIFTNIEPDHIGPNEHKDFEDYMACKGLLFRQCRVGIVNCDD
VHWQKVTEGHTCRLETYGFSEKADLQAYNMRLVTKPGSLGVDFEVRGLIDLSVETNTPGR
FSVYNALTAMAICAHFGVSGDDIKEALLHAHVRGRIEIVKVSDAFTLMIDYAHNAMALES
LLTTLKEYQPHRLVCLFGCGGNRSRLRRYEMGEVSGRLADLTVITSDNPRDEEPQDIIDD
IKTGIGRTAGEYVEICDRKEAIAYVIDHGQPGDIIVLAGKGHEDYQEIRGKKYPMDERVL
IADILRERGRTV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggctttaacgttattggagcggcttacttatacctgtgtgaagggagaccct
gacagagaagtgggagcgctcgtctatgattcgagaaagatcgaaagggactgcatgttt
gtctgcatcgcgggtgcgaatgtggacggacacagttttgcggcggaggcggcggagaag
ggagccgctgtgatcgtggtggaaaaagaggtggaaatcccggatgaaagcggggcgaca
atgatccgcgtggcggacacgagatatgcgctggcttttctttcggcggcttatttcggt
tatccggcggagcagatgaagatcatcggcatcacggggacgaagggcaagacgacgacg
acgtatctcgtgaagtctattttggaacatgccgggagaaccgtgggactgatcggcacg
atagaggcggtcatcggggagcggcatattccggcggccaatacgacaccggaatcctac
gtgctgcagcagtatctcagggagatggcggatgcggggtgcgatacggtcgtgatggaa
gtgtcgtcgcaggggctgatgatgcaccggacgcagggatttgtctttgacatcggtatt
tttaccaatatcgagccggatcatatcggaccaaatgaacataaagattttgaggattat
atggcctgcaaggggcttttgttccggcagtgccgggtggggatcgtgaactgtgacgac
gtccactggcagaaggtgacggagggacatacatgcaggctggaaacatatggattttcg
gagaaagctgacttgcaggcatacaacatgcgtcttgtgacgaaaccgggtagtcttggc
gtggactttgaggtgcgggggctgattgatctgtcggtggagacgaatacgccggggcgt
ttcagcgtctataatgcgctgacggcgatggcgatctgtgcacatttcggggtctccggg
gatgacatcaaggaggcgctgcttcatgcccatgtacggggcaggatcgagatcgtgaaa
gtgtcggatgcgtttacgctgatgatcgattatgcgcataatgcgatggcgctggagagt
ctgttgacgacgctgaaagaatatcagccgcatcggctggtctgtctgtttggctgtggg
ggcaatcgttccaggctgcgccgctatgagatgggagaggtgagcgggcgtctggcagat
ctgacagttatcacttccgacaatccgcgggacgaagagccgcaggacatcattgatgac
attaagacggggatcggcaggacagcgggcgaatatgtggagatctgtgaccgtaaggaa
gccatcgcctatgtcattgaccatggccagccgggagatattatcgtgcttgccggaaag
gggcatgaggattatcaggagatcagaggaaagaaatatccgatggatgagagagtgctg
atcgcggatattttgcgggaaagaggaaggactgtatga
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